Evidence map›Paper›PMID 24618812›Full record

ArticleViruses2014

Murine leukemia virus uses TREX components for efficient nuclear export of unspliced viral transcripts.

Toshie Sakuma, Jason M Tonne, Yasuhiro Ikeda

Open access · goldAbstract read
In one paragraph

Article in Viruses, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.6field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Toshie SakumaDepartment of Molecular Medicine, Mayo Clinic, Rochester, MN 55905 USA. sakuma.toshie@mayo.edu.
Jason M TonneDepartment of Molecular Medicine, Mayo Clinic, Rochester, MN 55905 USA. tonne.jason@mayo.edu.
Yasuhiro IkedaDepartment of Molecular Medicine, Mayo Clinic, Rochester, MN 55905 USA. ikeda.yasuhiro@mayo.edu.
Mayo Clinic in Arizona · US

Funding

Women's Cancer ProgramP30CA015083 · NCI · MAYO CLINIC ROCHESTER · PI Felicity Enders · 1985 to 2026
$151.3M
NCI NIH HHS P30 CA015083
6 · The paper itself

Abstract

Previously we reported that nuclear export of both unspliced and spliced murine leukemia virus (MLV) transcripts depends on the nuclear export factor (NXF1) pathway. Although the mRNA export complex TREX, which contains Aly/REF, UAP56, and the THO complex, is involved in the NXF1-mediated nuclear export of cellular mRNAs, its contribution to the export of MLV mRNA transcripts remains poorly understood. Here, we studied the involvement of TREX components in the export of MLV transcripts. Depletion of UAP56, but not Aly/REF, reduced the level of both unspliced and spliced viral transcripts in the cytoplasm. Interestingly, depletion of THO components, including THOC5 and THOC7, affected only unspliced viral transcripts in the cytoplasm. Moreover, the RNA immunoprecipitation assay showed that only the unspliced viral transcript interacted with THOC5. These results imply that MLV requires UAP56, THOC5 and THOC7, in addition to NXF1, for nuclear export of viral transcripts. Given that naturally intronless mRNAs, but not bulk mRNAs, require THOC5 for nuclear export, it is plausible that THOC5 plays a key role in the export of unspliced MLV transcripts.

Indexed as

Active Transport, Cell NucleusVirus ReplicationAnimalsDEAD-box RNA HelicasesLeukemia Virus, MurineNuclear ProteinsNucleocytoplasmic Transport ProteinsRNA-Binding ProteinsRNA, ViralDdx39b protein, mouseDEAD-box RNA HelicasesNuclear ProteinsNucleocytoplasmic Transport ProteinsNXF1 protein, mouseRNA-Binding ProteinsRNA, ViralTHOC5 protein, mouseTHOC7 protein, mouse

Identifiers

PMID24618812
PMCPMC3970143
OpenAlexW1971566761

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.