Evidence map›Paper›PMID 24616885›Full record

ArticleFrontiers in cellular and infection microbiology2014

Characterization of serine hydroxymethyltransferase GlyA as a potential source of D-alanine in Chlamydia pneumoniae.

Stefania De Benedetti, Henrike Bühl, Ahmed Gaballah, Anna Klöckner, Christian Otten, Tanja Schneider, Hans-Georg Sahl, Beate Henrichfreise

Open access · goldAbstract read
In one paragraph

Article in Frontiers in cellular and infection microbiology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
2.0field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 34 citations in OpenAlex.

  1. Article
  2. Infection and immunity · 2026
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  3. Exploring the Mechanism of HInternational journal of molecular sciences · 2024
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  12. Review
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  14. Article
  15. mBio · 2018
    Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. The role of viable but non-infectious developmental forms in chlamydial biology.Frontiers in cellular and infection microbiology · 2014
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Stefania De BenedettiPharmaceutical Microbiology Section, Institute for Medical Microbiology, Immunology and Parasitology, University of Bonn Bonn, Germany.
Henrike BühlPharmaceutical Microbiology Section, Institute for Medical Microbiology, Immunology and Parasitology, University of Bonn Bonn, Germany.
Ahmed GaballahPharmaceutical Microbiology Section, Institute for Medical Microbiology, Immunology and Parasitology, University of Bonn Bonn, Germany.
Anna KlöcknerPharmaceutical Microbiology Section, Institute for Medical Microbiology, Immunology and Parasitology, University of Bonn Bonn, Germany.
Christian OttenPharmaceutical Microbiology Section, Institute for Medical Microbiology, Immunology and Parasitology, University of Bonn Bonn, Germany.
Tanja SchneiderPharmaceutical Microbiology Section, Institute for Medical Microbiology, Immunology and Parasitology, University of Bonn Bonn, Germany.
Hans-Georg SahlPharmaceutical Microbiology Section, Institute for Medical Microbiology, Immunology and Parasitology, University of Bonn Bonn, Germany.
Beate HenrichfreisePharmaceutical Microbiology Section, Institute for Medical Microbiology, Immunology and Parasitology, University of Bonn Bonn, Germany.
University of Bonn · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

For intracellular Chlamydiaceae, there is no need to withstand osmotic challenges, and a functional cell wall has not been detected in these pathogens so far. Nevertheless, penicillin inhibits cell division in Chlamydiaceae resulting in enlarged aberrant bodies, a phenomenon known as chlamydial anomaly. D-alanine is a unique and essential component in the biosynthesis of bacterial cell walls. In free-living bacteria like Escherichia coli, penicillin-binding proteins such as monofunctional transpeptidases PBP2 and PBP3, the putative targets of penicillin in Chlamydiaceae, cross-link adjacent peptidoglycan strands via meso-diaminopimelic acid and D-Ala-D-Ala moieties of pentapeptide side chains. In the absence of genes coding for alanine racemase Alr and DadX homologs, the source of D-Ala and thus the presence of substrates for PBP2 and PBP3 activity in Chlamydiaceae has puzzled researchers for years. Interestingly, Chlamydiaceae genomes encode GlyA, a serine hydroxymethyltransferase that has been shown to exhibit slow racemization of D- and L-alanine as a side reaction in E. coli. We show that GlyA from Chlamydia pneumoniae can serve as a source of D-Ala. GlyA partially reversed the D-Ala auxotrophic phenotype of an E. coli racemase double mutant. Moreover, purified chlamydial GlyA had racemase activity on L-Ala in vitro and was inhibited by D-cycloserine, identifying GlyA, besides D-Ala ligase MurC/Ddl, as an additional target of this competitive inhibitor in Chlamydiaceae. Proof of D-Ala biosynthesis in Chlamydiaceae helps to clarify the structure of cell wall precursor lipid II and the role of chlamydial penicillin-binding proteins in the development of non-dividing aberrant chlamydial bodies and persistence in the presence of penicillin.

Indexed as

AlanineAlanine RacemaseChlamydophila pneumoniaeEscherichia coliGlycine HydroxymethyltransferaseRecombinant ProteinsAlanineAlanine RacemaseGlycine HydroxymethyltransferaseRecombinant Proteinsaberrant bodiesalanine racemasechlamydial anomalyD-alanineD-cycloserineGlyApenicillinpersistence

Identifiers

PMID24616885
PMCPMC3935232
OpenAlexW2109049009

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.