Evidence map›Paper›PMID 24616617›Full record

ArticleTheScientificWorldJournal2014

Ratsnake: a versatile image annotation tool with application to computer-aided diagnosis.

D K Iakovidis, T Goudas, C Smailis, I Maglogiannis

Open access · goldAbstract read
In one paragraph

Article in TheScientificWorldJournal, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 50 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Annotation Tools in Gastrointestinal Polyp Annotation.Diagnostics (Basel, Switzerland) · 2022
    Review
  6. Review
  7. Article
  8. GTCreator: a flexible annotation tool for image-based datasets.International journal of computer assisted radiology and surgery · 2019
    Article
  9. Article
  10. Efficacy Evaluation of SAVE for the Diagnosis of Superficial Neoplastic Lesion.IEEE journal of translational engineering in health and medicine · 2017
    Article
  11. Review
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

D K IakovidisDepartment of Informatics and Computer Technology, Technological Educational Institute of Lamia, 35100 Lamia, Greece.
T GoudasDepartment of Digital Systems, University of Piraeus, 18534 Piraeus, Greece.
C SmailisDepartment of Informatics and Computer Technology, Technological Educational Institute of Lamia, 35100 Lamia, Greece.
I MaglogiannisDepartment of Digital Systems, University of Piraeus, 18534 Piraeus, Greece.
Technological Educational Institute of Central Greece · GRUniversity of Piraeus · GR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Image segmentation and annotation are key components of image-based medical computer-aided diagnosis (CAD) systems. In this paper we present Ratsnake, a publicly available generic image annotation tool providing annotation efficiency, semantic awareness, versatility, and extensibility, features that can be exploited to transform it into an effective CAD system. In order to demonstrate this unique capability, we present its novel application for the evaluation and quantification of salient objects and structures of interest in kidney biopsy images. Accurate annotation identifying and quantifying such structures in microscopy images can provide an estimation of pathogenesis in obstructive nephropathy, which is a rather common disease with severe implication in children and infants. However a tool for detecting and quantifying the disease is not yet available. A machine learning-based approach, which utilizes prior domain knowledge and textural image features, is considered for the generation of an image force field customizing the presented tool for automatic evaluation of kidney biopsy images. The experimental evaluation of the proposed application of Ratsnake demonstrates its efficiency and effectiveness and promises its wide applicability across a variety of medical imaging domains.

Indexed as

Diagnosis, Computer-AssistedSoftwareArtificial IntelligenceHumans

Identifiers

PMID24616617
PMCPMC3926425
OpenAlexW2056962391

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.