Evidence map›Paper›PMID 24616444›Full record

ArticleChemMedChem2014

Time-dependent diaryl ether inhibitors of InhA: structure-activity relationship studies of enzyme inhibition, antibacterial activity, and in vivo efficacy.

Pan Pan, Susan E Knudson, Gopal R Bommineni, Huei-Jiun Li, Cheng-Tsung Lai, Nina Liu, Miguel Garcia-Diaz, Carlos Simmerling, Sachindra S Patil, Richard A Slayden and 1 more

Open access · greenAbstract read
In one paragraph

Article in ChemMedChem, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
4.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 56 citations in OpenAlex.

  1. Review
  2. Article
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  5. Review
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  7. Review
  8. New InhA Inhibitors Based on Expanded Triclosan andPharmaceuticals (Basel, Switzerland) · 2021
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Correlating Drug-Target Kinetics andChemical science · 2016
    Article
  16. Article
  17. Article
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Pan PanInstitute for Chemical Biology & Drug Discovery, Department of Chemistry, Stony Brook University, Stony Brook, NY 11794-3400 (USA).
Susan E Knudson
Gopal R Bommineni
Huei-Jiun Li
Cheng-Tsung Lai
Nina Liu
Miguel Garcia-Diaz
Carlos Simmerling
Sachindra S Patil
Richard A Slayden
Peter J Tonge
Stony Brook University · USColorado State University · USBiotech Park · IN

Funding

X-RAY STRUCTURE OF RIFM PROTEIN FROM THE BIOSYNTHESIS PATHWAY OF THE ANSAMYCIN AP41RR012408 · NCRR · BROOKHAVEN SCIENCE ASSOC-BROOKHAVEN LAB · PI ORVILLE, ALLEN M · 1998 to 2011
$32.2M
Life Science and Biomedical technology Research center at NSLS-II LSBRP41GM111244 · NIGMS · BROOKHAVEN SCIENCE ASSOC-BROOKHAVEN LAB · PI MCSWEENEY, SEAN · 2014 to 2018
$16.4M
Macromolecular Crystallography at the National Synchrotron Light SourceP41GM103473 · NIGMS · BROOKHAVEN SCIENCE ASSOC-BROOKHAVEN LAB · PI SWEET, ROBERT M · 2012 to 2013
$4.9M
Chemotherapeutics Against Multi-Drug Resistant TuberculosisU01AI070383 · NIAID · STATE UNIVERSITY NEW YORK STONY BROOK · PI TONGE, PETER J · 2006 to 2010
$3.4M
Mechanism of Slow Onset Enzyme Inhibition and Translation to Time-Dependent Drug ActivityR01GM102864 · NIGMS · STATE UNIVERSITY NEW YORK STONY BROOK · PI TONGE, PETER J · 2012 to 2021
$2.6M
NCRR NIH HHS P41RR012408NIAID NIH HHS AI070383NIAID NIH HHS U01 AI070383NIGMS NIH HHS GM102864NIGMS NIH HHS P41 GM103473NIGMS NIH HHS P41GM103473NIGMS NIH HHS P41 GM111244NIGMS NIH HHS R01 GM102864
6 · The paper itself

Abstract

The diaryl ethers are a novel class of antituberculosis drug candidates that inhibit InhA, the enoyl-ACP reductase involved in the fatty acid biosynthesis (FASII) pathway, and have antibacterial activity against both drug-sensitive and drug-resistant strains of Mycobacterium tuberculosis. In the present work, we demonstrate that two time-dependent B-ring modified diaryl ether InhA inhibitors have antibacterial activity in a mouse model of TB infection when delivered by intraperitoneal injection. We propose that the efficacy of these compounds is related to their residence time on the enzyme, and to identify structural features that modulate drug-target residence time in this system, we have explored the inhibition of InhA by a series of B-ring modified analogues. Seven ortho-substituted compounds were found to be time-dependent inhibitors of InhA, where the slow step leading to the final enzyme-inhibitor complex (EI*) is thought to correlate with closure and ordering of the InhA substrate binding loop. A detailed mechanistic understanding of the molecular basis for residence time in this system will facilitate the development of InhA inhibitors with improved in vivo activity.

Indexed as

AnimalsAnti-Bacterial AgentsCrystallography, X-RayDisease Models, AnimalDose-Response Relationship, DrugEnzyme InhibitorsEthersInhibinsMiceMice, Inbred C57BLMicrobial Sensitivity TestsModels, MolecularMolecular StructureMycobacterium tuberculosisStructure-Activity RelationshipTime FactorsAnti-Bacterial AgentsEnzyme InhibitorsEthersinhibin-alpha subunitInhibinsdiaryl ethersenoyl-ACP reductasesfatty acid biosynthesisInhAinhibitorsstructure-activity relationshipstime-dependent inhibition

Identifiers

PMID24616444
PMCPMC4126670
OpenAlexW2064246775

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.