Evidence map›Paper›PMID 24614976›Full record

ArticleGenome research2014

Polymerase theta-mediated end joining of replication-associated DNA breaks in C. elegans.

Sophie F Roerink, Robin van Schendel, Marcel Tijsterman

Open access · bronzeAbstract read
In one paragraph

Article in Genome research, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 111 papers.

0numbers the graph read from it
0cells of the map it votes in
111citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

111 citing papers in PubMed, 166 citations in OpenAlex.

  1. Article
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  10. The Evolutionary Potential of Chromoanagenesis.Methods in molecular biology (Clifton, N.J.) · 2025
    Article
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  12. Review
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  19. Genomic consequences associated with Agrobacterium-mediated transformation of plants.The Plant journal : for cell and molecular biology · 2024
    Review
  20. POLQ to the rescue for double-strand break repair during mitosis.Nature structural & molecular biology · 2023
    Article

51 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Sophie F RoerinkDepartment of Toxicogenetics, Leiden University Medical Center, 2300 RC Leiden, The Netherlands.
Robin van SchendelDepartment of Toxicogenetics, Leiden University Medical Center, 2300 RC Leiden, The Netherlands.
Marcel TijstermanDepartment of Toxicogenetics, Leiden University Medical Center, 2300 RC Leiden, The Netherlands.
Leiden University Medical Center · NL

Funding

European Research Council 203379
6 · The paper itself

Abstract

DNA lesions that block replication fork progression are drivers of cancer-associated genome alterations, but the error-prone DNA repair mechanisms acting on collapsed replication are incompletely understood, and their contribution to genome evolution largely unexplored. Here, through whole-genome sequencing of animal populations that were clonally propagated for more than 50 generations, we identify a distinct class of deletions that spontaneously accumulate in C. elegans strains lacking translesion synthesis (TLS) polymerases. Emerging DNA double-strand breaks are repaired via an error-prone mechanism in which the outermost nucleotide of one end serves to prime DNA synthesis on the other end. This pathway critically depends on the A-family polymerase theta, which protects the genome against gross chromosomal rearrangements. By comparing the genomes of isolates of C. elegans from different geographical regions, we found that in fact most spontaneously evolving structural variations match the signature of polymerase theta-mediated end joining (TMEJ), illustrating that this pathway is an important source of genetic diversification.

Indexed as

DNA Breaks, Double-StrandedDNA End-Joining RepairAnimalsCaenorhabditis elegansCaenorhabditis elegans ProteinsDNA-Directed DNA PolymeraseDNA Polymerase thetaDNA ReplicationGenome, HelminthGenomic Structural VariationCaenorhabditis elegans ProteinsDNA-Directed DNA PolymeraseDNA Polymerase theta

Identifiers

PMID24614976
PMCPMC4032859
OpenAlexW2009468840

What OpenQuestion holds

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LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.