Evidence map›Paper›PMID 24610927›Full record

ArticleJournal of the American Society of Nephrology : JASN2014

Mutations in ANKS6 cause a nephronophthisis-like phenotype with ESRD.

Ekim Z Taskiran, Emine Korkmaz, Safak Gucer, Can Kosukcu, Figen Kaymaz, Cansu Koyunlar, Elizabeth C Bryda, Moumita Chaki, Dongmei Lu, Komal Vadnagara and 6 more

Open access · bronzeAbstract read
In one paragraph

Article in Journal of the American Society of Nephrology : JASN, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 40 citations in OpenAlex.

  1. Article
  2. Genes · 2024
    Article
  3. Dimerization activates the Inversin complex inMolecular biology of the cell · 2024
    Article
  4. TheBiomedicines · 2024
    Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Mitigation of portal fibrosis and cholestatic liver disease in ANKS6-deficient livers by macrophage depletion.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2022
    Article
  10. Review
  11. Renal Ciliopathies: Sorting Out Therapeutic Approaches for Nephronophthisis.Frontiers in cell and developmental biology · 2021
    Review
  12. Article
  13. Identification of NovelFrontiers in genetics · 2020
    Article
  14. Metabolic perturbations caused by depletion of nephronophthisis factor Anks6 in mIMCD3 cells.Metabolomics : Official journal of the Metabolomic Society · 2019
    Article
  15. Modeling congenital kidney diseases inDisease models & mechanisms · 2019
    Review
  16. Review
  17. Article
  18. Article
  19. Intracellular calcium increases in vascular smooth muscle cells with progression of chronic kidney disease in a rat model.Nephrology, dialysis, transplantation : official publication of the European Dialysis and Transplant Association - European Renal Association · 2017
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 8 institutions in 3 countries.

Ekim Z TaskiranNephrogenetics Laboratory, andDepartments of Medical Genetics.
Emine KorkmazNephrogenetics Laboratory, and.
Safak GucerPediatric Pathology.
Can KosukcuNephrogenetics Laboratory, and.
Figen KaymazHistology and Embryology, and.
Cansu KoyunlarNephrogenetics Laboratory, and.
Elizabeth C BrydaDepartment of Veterinary Pathobiology, College of Veterinary Medicine, University of Missouri, Columbia, Missouri;
Moumita ChakiDepartment of Internal Medicine, and.
Dongmei LuDepartment of Internal Medicine, and.
Komal VadnagaraDepartment of Internal Medicine, and.
Cengiz Candan**Department of Pediatric Nephrology, Istanbul Medeniyet University, Istanbul, Turkey;
Rezan TopalogluPediatric Nephrology, Hacettepe University Faculty of Medicine, Ankara, Turkey;
Franz SchaeferPediatric Nephrology Division, Center for Pediatrics and Adolescent Medicine, Heidelberg, Germany;
Massimo AttanasioDepartment of Internal Medicine, andEugene McDermott Center for Growth and Development, University of Texas Southwestern Medical Center, Dallas, Texas;
Carsten BergmannCenter for Human Genetics, Bioscientia, Ingelheim, Germany; Department of Nephrology and Center for Clinical Research, University Hospital, Freiburg, Germany; and.
Fatih OzaltinNephrogenetics Laboratory, andPediatric Nephrology, Hacettepe University Faculty of Medicine, Ankara, Turkey; Hacettepe University Center for Biobanking and Genomics, Ankara, Turkey fozaltin@hacettepe.edu.tr.
Istanbul Medeniyet University · TRReprogenetics · USHacettepe University · TRHeidelberg University · DEMedical Genetics Center · DEMissouri College · USThe University of Texas Southwestern Medical Center · USUniversity of Missouri · US

Funding

Role of GLIS2 in the Development of Cystic Kidney DiseaseR01DK090326 · NIDDK · UT SOUTHWESTERN MEDICAL CENTER · PI ATTANASIO, MASSIMO · 2012 to 2016
$1.7M
NIDDK NIH HHS 1R01-DK090326-01A1NIDDK NIH HHS R01 DK090326
6 · The paper itself

Abstract

Nephronophthisis (NPHP) is one of the most common genetic causes of CKD; however, the underlying genetic abnormalities have been established in <50% of patients. We performed genome-wide analysis followed by targeted resequencing in a Turkish consanguineous multiplex family and identified a canonic splice site mutation in ANKS6 associated with an NPHP-like phenotype. Furthermore, we identified four additional ANKS6 variants in a cohort of 56 unrelated patients diagnosed with CKD due to nephronophthisis, chronic GN, interstitial nephritis, or unknown etiology. Immunohistochemistry in human embryonic kidney tissue demonstrated that the expression patterns of ANKS6 change substantially during development. Furthermore, we detected increased levels of both total and active β-catenin in precystic tubuli in Han:SPRD Cy/+ rats. Overall, these data indicate the importance of ANKS6 in human kidney development and suggest a mechanism by which mutations in ANKS6 may contribute to an NPHP-like phenotype in humans.

Indexed as

PhenotypeAdolescentAdultChildCohort StudiesFemaleHumansInfantKidney Diseases, CysticKidney Failure, ChronicMaleMiddle AgedMutationNuclear ProteinsPedigreeTurkeyANKS6 protein, humanNuclear Proteinschronic renal failureend stage kidney diseaseend stage renal diseasefamilial nephropathygenetic renal disease

Identifiers

PMID24610927
PMCPMC4116054
OpenAlexW2119694042

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.