Evidence map›Paper›PMID 24610875›Full record

ArticleThe Journal of infectious diseases2014

Association study of genes controlling IL-12-dependent IFN-γ immunity: STAT4 alleles increase risk of pulmonary tuberculosis in Morocco.

Ayoub Sabri, Audrey V Grant, Kristel Cosker, Safa El Azbaoui, Ahmed Abid, Ismail Abderrahmani Rhorfi, Hicham Souhi, Hicham Janah, Kebir Alaoui-Tahiri, Yasser Gharbaoui and 11 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of infectious diseases, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 35 citations in OpenAlex.

  1. Article
  2. Genes · 2024
    Article
  3. STAT4 gene polymorphisms in human diseases.Frontiers in immunology · 2024
    Review
  4. MedComm · 2023
    Review
  5. Review
  6. Review
  7. Article
  8. Tuberculosis susceptibility and protection in children.The Lancet. Infectious diseases · 2019
    Review
  9. Article
  10. Polymorphisms of theBioscience reports · 2018
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Pott's disease in Moroccan children: clinical features and investigation of the interleukin-12/interferon-γ pathway.The international journal of tuberculosis and lung disease : the official journal of the International Union against Tuberculosis and Lung Disease · 2015
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 10 institutions in 4 countries.

Ayoub SabriGenetics Unit, Military Hospital Mohamed V, Hay Riad, Rabat, Morocco Faculty of Science-Kenitra, Ibn Tofail University, Kenitra, Morocco.
Audrey V GrantLaboratory of Human Genetics of Infectious Diseases, Necker Branch, Institut National de la Santé et de la Recherche Médicale U1163, Paris, France Paris Descartes University, Sorbonne Paris Cité, Imagine Institute, Paris, France.
Kristel CoskerLaboratory of Human Genetics of Infectious Diseases, Necker Branch, Institut National de la Santé et de la Recherche Médicale U1163, Paris, France Paris Descartes University, Sorbonne Paris Cité, Imagine Institute, Paris, France.
Safa El AzbaouiGenetics Unit, Military Hospital Mohamed V, Hay Riad, Rabat, Morocco Faculty of Science-Kenitra, Ibn Tofail University, Kenitra, Morocco.
Ahmed AbidDepartment of Pneumology, Military Hospital Mohamed V, Hay Riad, Rabat, Morocco.
Ismail Abderrahmani RhorfiDepartment of Pneumology, Military Hospital Mohamed V, Hay Riad, Rabat, Morocco.
Hicham SouhiDepartment of Pneumology, Military Hospital Mohamed V, Hay Riad, Rabat, Morocco.
Hicham JanahDepartment of Pneumology, Military Hospital Mohamed V, Hay Riad, Rabat, Morocco.
Kebir Alaoui-TahiriDepartment of Pneumology, Military Hospital Mohamed V, Hay Riad, Rabat, Morocco.
Yasser GharbaouiDepartment of Pneumology, Military Hospital Mohamed V, Hay Riad, Rabat, Morocco.
Majid BenkiraneBlood Transfusion Center, Military Hospital Mohamed V, Hay Riad, Rabat, Morocco.
Marianna OrlovaMcGill International TB Centre, The Research Institute of the McGill University Health Centre, Montreal, Canada.
Anne BolandCEA, Institut de Génomique, Centre National de Génotypage, Evry, France.
Caroline DeswarteLaboratory of Human Genetics of Infectious Diseases, Necker Branch, Institut National de la Santé et de la Recherche Médicale U1163, Paris, France Paris Descartes University, Sorbonne Paris Cité, Imagine Institute, Paris, France.
Melanie MigaudLaboratory of Human Genetics of Infectious Diseases, Necker Branch, Institut National de la Santé et de la Recherche Médicale U1163, Paris, France Paris Descartes University, Sorbonne Paris Cité, Imagine Institute, Paris, France.
Jacinta BustamanteLaboratory of Human Genetics of Infectious Diseases, Necker Branch, Institut National de la Santé et de la Recherche Médicale U1163, Paris, France Paris Descartes University, Sorbonne Paris Cité, Imagine Institute, Paris, France Center for the Study of Primary Immunodeficiencies, AP-HP, Necker hospital, Paris France.
Erwin SchurrMcGill International TB Centre, The Research Institute of the McGill University Health Centre, Montreal, Canada.
Stephanie Boisson-DupuisLaboratory of Human Genetics of Infectious Diseases, Necker Branch, Institut National de la Santé et de la Recherche Médicale U1163, Paris, France Paris Descartes University, Sorbonne Paris Cité, Imagine Institute, Paris, France St. Giles Laboratory of Human Genetics of Infectious Diseases, Rockefeller Branch, The Rockefeller University, New York, New York.
Jean-Laurent CasanovaLaboratory of Human Genetics of Infectious Diseases, Necker Branch, Institut National de la Santé et de la Recherche Médicale U1163, Paris, France Paris Descartes University, Sorbonne Paris Cité, Imagine Institute, Paris, France St. Giles Laboratory of Human Genetics of Infectious Diseases, Rockefeller Branch, The Rockefeller University, New York, New York Pediatric Hematology-Immunology Unit, AP-HP, Necker Hospital, Paris, France.
Laurent AbelLaboratory of Human Genetics of Infectious Diseases, Necker Branch, Institut National de la Santé et de la Recherche Médicale U1163, Paris, France Paris Descartes University, Sorbonne Paris Cité, Imagine Institute, Paris, France St. Giles Laboratory of Human Genetics of Infectious Diseases, Rockefeller Branch, The Rockefeller University, New York, New York.
Jamila El BaghdadiGenetics Unit, Military Hospital Mohamed V, Hay Riad, Rabat, Morocco.
Hôpital Militaire Moulay Ismail · MAMcGill University Health Centre · CARockefeller University · USUniversité Ibn-Tofail · MAUniversité Paris Cité · FRGenoscope · FRHôpital Necker-Enfants Malades · FRInserm · FRInstitut de Génétique Humaine · FRSorbonne Paris Cité · FR

Funding

Genetic predisposition to tuberculosis in MoroccoU01AI088685 · NIAID · ROCKEFELLER UNIVERSITY · PI ABEL, LAURENT, CASANOVA, JEAN-LAURENT · 2010 to 2014
$3.3M
A genetic dissection of Mendelian susceptibility to mycobacterial diseases (MSMD)R01AI089970 · NIAID · ROCKEFELLER UNIVERSITY · PI CASANOVA, JEAN-LAURENT · 2010 to 2014
$2.5M
European Research Council 268777NIAID NIH HHS R01 AI089970NIAID NIH HHS R01AI089970NIAID NIH HHS U01 AI088685NIAID NIH HHS U01AI088685PHS HHS 8ULTR000043
6 · The paper itself

Abstract

backgroundOnly a minority of individuals infected with Mycobacterium tuberculosis develop clinical tuberculosis. Genetic epidemiological evidence suggests that pulmonary tuberculosis has a strong human genetic component. Previous genetic findings in Mendelian predisposition to more severe mycobacterial infections, including by M. tuberculosis, underlined the importance of the interleukin 12 (IL-12)/interferon γ (IFN-γ) circuit in antimycobacterial immunity.

methodsWe conducted an association study in Morocco between pulmonary tuberculosis and a panel of single-nucleotide polymorphisms (SNPs) covering 14 core IL-12/IFN-γ circuit genes. The analyses were performed in a discovery family-based sample followed by replication in a case-control population.

resultsOut of 228 SNPs tested in the family-based sample, 6 STAT4 SNPs were associated with pulmonary tuberculosis (P = .0013-.01). We replicated the same direction of association for 1 cluster of 3 SNPs encompassing the promoter region of STAT4. In the combined sample, the association was stronger among younger subjects (pulmonary tuberculosis onset <25 years) with an odds ratio of developing pulmonary tuberculosis at rs897200 for GG vs AG/AA subjects of 1.47 (1.06-2.04). Previous functional experiments showed that the G allele of rs897200 was associated with lower STAT4 expression.

conclusionsOur present findings in a Moroccan population support an association of pulmonary tuberculosis with STAT4 promoter-region polymorphisms that may impact STAT4 expression.

Indexed as

AdolescentAdultAgedAllelesCase-Control StudiesChildChild, PreschoolFemaleGenetic Predisposition to DiseaseGenotypeHumansInfantInterferon-gammaInterleukin-12MaleMiddle AgedInterferon-gammaInterleukin-12STAT4 protein, humanSTAT4 Transcription FactorBehcet diseasecandidate pathwaycommon varianteQTLfamily-based studygenetic associationIFN-γIL-12pulmonary tuberculosisSTAT4

Identifiers

PMID24610875
PMCPMC4111910
OpenAlexW2123358740

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LicenceCC BY-NC-ND
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.