Evidence map›Paper›PMID 24607644›Full record

ReviewCurrent opinion in microbiology2014

Redox-driven regulation of microbial community morphogenesis.

Chinweike Okegbe, Alexa Price-Whelan, Lars E P Dietrich

Abstract readReview
In one paragraph

Review in Current opinion in microbiology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
3.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 73 citations in OpenAlex.

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  19. MarR Family Transcription Factors fromMicrobiology and molecular biology reviews : MMBR · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Chinweike OkegbeDepartment of Biological Sciences, Columbia University, New York, NY 10027, United States.
Alexa Price-WhelanDepartment of Biological Sciences, Columbia University, New York, NY 10027, United States.
Lars E P DietrichDepartment of Biological Sciences, Columbia University, New York, NY 10027, United States. Electronic address: LDietrich@columbia.edu.
Columbia University · US

Funding

Integration of redox-balancing mechanisms in Pseudomonas aeruginosa biofilmsR01AI103369 · NIAID · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI DIETRICH, LARS · 2013 to 2022
$4.1M
Howard Hughes Medical InstituteNIAID NIH HHS R01 AI103369
6 · The paper itself

Abstract

During growth on surfaces, diverse microbial communities display topographies with captivating patterns. The quality and quantity of matrix excreted by resident cells play major roles in determining community architecture. Two current publications indicate that the cellular redox state and respiratory activity are important parameters affecting matrix output in the divergent bacteria Pseudomonas aeruginosa and Bacillus subtilis. These and related studies have identified regulatory proteins with the potential to respond to changes in redox state and respiratory electron transport and modulate the activity of the signal transduction pathways that control matrix production. These developments hint at the critical mechanistic links between environmental sensing and community behavior, and provide an exciting new context within which to interpret the molecular details of biofilm structure determination.

Indexed as

Bacterial Physiological PhenomenaOxidation-ReductionAdaptation, BiologicalBacillus subtilisBiofilmsElectron TransportGene Expression Regulation, BacterialPseudomonas aeruginosaSignal Transduction

Identifiers

PMID24607644
PMCPMC3999281
OpenAlexW2093786632

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.