Evidence map›Paper›PMID 24606126›Full record

ArticleMolecular endocrinology (Baltimore, Md.)2014

Genome-wide identification of AR-regulated genes translated in Sertoli cells in vivo using the RiboTag approach.

Karel De Gendt, Guido Verhoeven, Paul S Amieux, Miles F Wilkinson

Open access · bronzeAbstract read
In one paragraph

Article in Molecular endocrinology (Baltimore, Md.), 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
4.7field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 62 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Sertoli cells as a hub in testicular development and male reproductive.Frontiers in cell and developmental biology · 2025
    Review
  6. Article
  7. Review
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Androgen Actions in the Testis and the Regulation of Spermatogenesis.Advances in experimental medicine and biology · 2021
    Review
  15. Article
  16. Characterization of rodent Sertoli cell primary cultures.Molecular reproduction and development · 2020
    Review
  17. Article
  18. Article
  19. Article
  20. Global polysome analysis of normal and injured podocytes.American journal of physiology. Renal physiology · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 2 countries.

Karel De GendtDepartment of Reproductive Medicine and Institute of Genomic Medicine (M.F.W.), University of California, La Jolla, California 92093 (K.D.G., M.F.W.); Department of Clinical and Experimental Medicine, KU Leuven, 3000 Leuven, Belgium (K.D.G., G.V.); and Department of Biology, Western Washington University, Bellingham, Washington 98225 (P.S.A.).
Guido Verhoeven
Paul S Amieux
Miles F Wilkinson
KU Leuven · BEUniversity of California, San Diego · USWestern Washington University · US

Funding

Regulation and Function of the Rhox5 Homeobox GeneR01HD045595 · NICHD · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI WILKINSON, MILES FROME · 2003 to 2013
$2.9M
Androgen-Dependent Rhox Homeobox GenesR01HD053808 · NICHD · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI WILKINSON, MILES FROME · 2007 to 2011
$1.6M
NICHD NIH HHS HD045595NICHD NIH HHS HD053808NICHD NIH HHS R01 HD045595NICHD NIH HHS R01 HD053808
6 · The paper itself

Abstract

An understanding of the molecular mechanisms by which androgens drive spermatogenesis has been thwarted by the fact that few consistent androgen receptor (AR) target genes have been identified. Here, we addressed this issue using next-generation sequencing coupled with the RiboTag approach, which purifies translated mRNAs expressed in cells that express cyclic recombinase (CRE). Using RiboTag mice expressing CRE in Sertoli cells (SCs), we identified genes expressed specifically in SCs in both prepubertal and adult mice. Unexpectedly, this analysis revealed that the SC-specific gene program is already largely defined at the initiation of spermatogenesis despite the subsequent dramatic maturational changes known to occur in SCs. To identify AR-regulated genes, we generated triple-mutant mice in which the SCs express the RiboTag but lack ARs. RNA sequencing analysis revealed hundreds of SC-expressed AR-regulated genes that had previously gone unnoticed, including suppressed genes involved in ovarian development. Comparison of the SC-enriched dataset with that from the whole testes allowed us to classify genes in terms of their degree of expression in SCs. This revealed that a greater fraction of AR-up-regulated genes than AR-down-regulated genes were expressed predominantly in SCs. Our results also revealed that AR signaling in SCs causes a large number of genes not detectably expressed in SCs to undergo altered expression, thereby providing genome-wide evidence for wide-scale communication between SCs and other cells. Taken together, our results identified novel classes of genes expressed in a hormone-dependent manner in different testicular cell subsets and highlight a new approach to analyze cell type-specific gene regulation.

Indexed as

Gene Expression RegulationGenetic TechniquesAndrogensAnimalsDown-RegulationGenomeMaleMiceMice, Inbred C57BLMice, KnockoutPhenotypeProtein BiosynthesisReceptors, AndrogenRNA, MessengerSequence Analysis, RNASertoli CellsAndrogensReceptors, AndrogenRNA, Messenger

Identifiers

PMID24606126
PMCPMC3968405
OpenAlexW2047023633

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.