Evidence map›Paper›PMID 24603864›Full record

ArticlePloS one2014

Combinatorial assembly of small molecules into bivalent antagonists of TrkC or TrkA receptors.

Fouad Brahimi, Eunhwa Ko, Andrey Malakhov, Kevin Burgess, H Uri Saragovi

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.4field-weighted citation impact, top 45% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 15 citations in OpenAlex.

  1. Selective Modulation of Trk Receptors byACS chemical neuroscience · 2025
    Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Click-Addressable Cassette for Photoaffinity Labeling.ACS medicinal chemistry letters · 2018
    Article
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Fouad BrahimiLady Davis Institute-Jewish General Hospital, Montreal, Quebec, Canada.
Eunhwa KoDepartment of Chemistry, Texas A&M University. Texas, United States of America.
Andrey MalakhovDepartment of Chemistry, Texas A&M University. Texas, United States of America.
Kevin BurgessDepartment of Chemistry, Texas A&M University. Texas, United States of America.
H Uri SaragoviLady Davis Institute-Jewish General Hospital, Montreal, Quebec, Canada; Department of Pharmacology and Therapeutics, McGill University, Montreal, Quebec, Canada; Department of Oncology and the Cancer Center, McGill University, Montreal, Quebec, Canada.
Texas A&M University · USJewish General Hospital · CAMcGill University · CA

Funding

Institute for Integration of Medicine & Science: A Partnership to Improve HealthUL1TR001120 · NCATS · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI CLARK, ROBERT A, HARGREAVES, KENNETH M · 2013 to 2017
$16.5M
Institutional Research Training GrantT32DE014318 · NIDCR · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI Kenneth M Hargreaves · 2002 to 2026
$12.1M
Design and Synthesis of Functional NGF PeptidomimeticsR01MH070040 · NIMH · TEXAS A&M UNIVERSITY SYSTEM · PI BURGESS, KEVIN · 2005 to 2009
$1.9M
Evolving Libraries of Bivalent Compounds (RMI)P41GM076261 · NIGMS · TEXAS A&M UNIVERSITY SYSTEM · PI BURGESS, KEVIN · 2005 to 2007
$1.0M
NCATS NIH HHS UL1 TR001120NIDCR NIH HHS T32 DE014318NIGMS NIH HHS GM076261NIGMS NIH HHS P41 GM076261NIMH NIH HHS MH070040NIMH NIH HHS R01 MH070040
6 · The paper itself

Abstract

A library of peptidomimetics was assembled combinatorially into dimers on a triazine-based core. The pharmacophore corresponds to β-turns of the neurotrophin polypeptides neurotrophin-3 (NT-3), nerve growth factor (NGF), or brain-derived neurotrophic factor (BDNF). These are the natural ligands for TrkC, TrkA, and TrkB receptors, respectively. The linker length and the side-chain orientation of each monomer within the bivalent mimics were systematically altered, and the impact of these changes on the function of each ligand was evaluated. While the monovalent peptidomimetics had no detectable binding or bioactivity, four bivalent peptidomimetics (2c, 2d, 2e, 3f) are selective TrkC ligands with antagonistic activity, and two bivalent peptidomimetics (1a, 1b) are TrkC and TrkA ligands with antagonistic activity. All these bivalent compounds block ligand-dependent receptor activation and cell survival, without affecting neuritogenic differentiation. This work adds to our understanding of how the neurotrophins function through Trk receptors, and demonstrates that peptidomimetics can be designed to selectively disturb specific biological signals, and may be used as pharmacological probes or as therapeutic leads. The concept of altering side-chain, linker length, and sequence orientation of a subunit within a pharmacophore provides an easy modular approach to generate larger libraries with diversified bioactivity.

Indexed as

AnimalsBlotting, WesternBrain-Derived Neurotrophic FactorCell Line, TumorCells, CulturedCell SurvivalCombinatorial Chemistry TechniquesHumansMiceMice, Inbred C57BLModels, ChemicalMolecular StructureNerve Growth FactorNeurotrophin 3NIH 3T3 CellsPC12 CellsBrain-Derived Neurotrophic FactorNerve Growth FactorNeurotrophin 3PeptidomimeticsReceptor, trkAReceptor, trkCSmall Molecule Libraries

Identifiers

PMID24603864
PMCPMC3945644
OpenAlexW1998673890

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.