Evidence map›Paper›PMID 24603695›Full record

ArticlePloS one2014

A functionally significant polymorphism in ID3 is associated with human coronary pathology.

Ani Manichaikul, Stephen S Rich, Heather Perry, Joseph Yeboah, Michelle Law, Molly Davis, Matthew Parker, Michael Ragosta, Jessica J Connelly, Coleen A McNamara and 1 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 24 citations in OpenAlex.

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  4. Article
  5. Article
  6. Atherosclerosis Impairs Naive CD4 T-Cell Responses via Disruption of Glycolysis.Arteriosclerosis, thrombosis, and vascular biology · 2021
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  8. Naive CD8Arteriosclerosis, thrombosis, and vascular biology · 2020
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  12. Review
  13. Human Monocyte Heterogeneity as Revealed by High-Dimensional Mass Cytometry.Arteriosclerosis, thrombosis, and vascular biology · 2019
    Article
  14. Article
  15. Article
  16. Review
  17. Review
4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Ani ManichaikulCenter for Public Health Genomics, University of Virginia, Charlottesville, Virginia, United States of America; Division of Biostatistics and Epidemiology, Department of Public Health Sciences, University of Virginia, Charlottesville, Virginia, United States of America.
Stephen S RichCenter for Public Health Genomics, University of Virginia, Charlottesville, Virginia, United States of America.
Heather PerryCardiovascular Research Center, University of Virginia, Charlottesville, Virginia, United States of America.
Joseph YeboahDepartment of Internal Medicine/Cardiology, Wake Forest University Health Sciences, Winston Salem, North Carolina, United States of America.
Michelle LawCardiovascular Research Center, University of Virginia, Charlottesville, Virginia, United States of America; Division of Cardiovascular Medicine, Department of Medicine, University of Virginia, Charlottesville, Virginia, United States of America.
Molly DavisCardiovascular Research Center, University of Virginia, Charlottesville, Virginia, United States of America.
Matthew ParkerCardiovascular Research Center, University of Virginia, Charlottesville, Virginia, United States of America.
Michael RagostaDivision of Cardiovascular Medicine, Department of Medicine, University of Virginia, Charlottesville, Virginia, United States of America.
Jessica J ConnellyCardiovascular Research Center, University of Virginia, Charlottesville, Virginia, United States of America; Division of Cardiovascular Medicine, Department of Medicine, University of Virginia, Charlottesville, Virginia, United States of America.
Coleen A McNamaraCardiovascular Research Center, University of Virginia, Charlottesville, Virginia, United States of America; Division of Cardiovascular Medicine, Department of Medicine, University of Virginia, Charlottesville, Virginia, United States of America.
Angela M TaylorCardiovascular Research Center, University of Virginia, Charlottesville, Virginia, United States of America; Division of Cardiovascular Medicine, Department of Medicine, University of Virginia, Charlottesville, Virginia, United States of America.
University of Virginia · USWake Forest University · US

Funding

CTSA INFRASTRUCTURE FOR PEDIATRIC RESEARCHUL1RR024156 · NCRR · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI GINSBERG, HENRY N · 2006 to 2011
$53.0M
ROLE OF LIPOXYGENASES IN ATHEROGENESIS IN DIABETES MELLITUSP01HL055798 · NHLBI · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI HEDRICK, CATHERINE C · 1995 to 2016
$28.4M
Multi-Ethnic Study of Atherosclerosis (MESA) StudyR01HL071205 · NHLBI · CEDARS-SINAI MEDICAL CENTER · PI ROTTER, JEROME I · 2003 to 2007
$10.4M
Local B-1 Regulation of AtherosclerosisR01HL136098 · NHLBI · UNIVERSITY OF VIRGINIA · PI MCNAMARA, COLEEN A · 2017 to 2020
$3.1M
Vascular Biology ResearchT32HL007355 · NHLBI · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI MCNAMARA, COLEEN A · 1985 to 2009
$2.6M
Genetic Regulation of B Lymphocyte Aortic Homing and AtheroprotectionR01HL107490 · NHLBI · UNIVERSITY OF VIRGINIA · PI MCNAMARA, COLEEN A · 2011 to 2014
$1.5M
MESA Family Study - Columbia University Field CenterR01HL071252 · NHLBI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI SHEA, STEVEN J · 2003 to 2007
$1.3M
Id3/B Lymphocytes and AtherosclerosisR01HL096447 · NHLBI · UNIVERSITY OF VIRGINIA · PI MCNAMARA, COLEEN A · 2009 to 2010
$1.0M
MESA Family StudyR01HL071250 · NHLBI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI LIU, KIANG JOHN · 2003 to 2007
$991k
MESA Family StudyR01HL071258 · NHLBI · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI BURKE, GREGORY L · 2003 to 2007
$918k
MESA Family StudyR01HL071259 · NHLBI · JOHNS HOPKINS UNIVERSITY · PI POST, WENDY S · 2003 to 2007
$878k
MESA Family StudyR01HL071051 · NHLBI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI WATSON, KAROL E · 2003 to 2007
$875k
NCRR NIH HHS RR-024156NCRR NIH HHS UL1 RR024156NHLBI NIH HHS K23 HL093118NHLBI NIH HHS K23HL093118-04NHLBI NIH HHS N01 HC095159NHLBI NIH HHS N01 HC095169NHLBI NIH HHS N01-HC-95159NHLBI NIH HHS N01-HC-95169NHLBI NIH HHS N02-HL-6-4278NHLBI NIH HHS P01 HL055798NHLBI NIH HHS P01 HL55798NHLBI NIH HHS R01 HL071051NHLBI NIH HHS R01HL071051NHLBI NIH HHS R01 HL071205NHLBI NIH HHS R01HL071205NHLBI NIH HHS R01 HL071250NHLBI NIH HHS R01HL071250NHLBI NIH HHS R01 HL071251NHLBI NIH HHS R01HL071251NHLBI NIH HHS R01 HL071252NHLBI NIH HHS R01HL071252NHLBI NIH HHS R01 HL071258NHLBI NIH HHS R01HL071258NHLBI NIH HHS R01 HL071259NHLBI NIH HHS R01HL071259NHLBI NIH HHS R01 HL096447NHLBI NIH HHS R01 HL107490NHLBI NIH HHS R01 HL136098NHLBI NIH HHS T32 HL007355
6 · The paper itself

Abstract

aimsWe previously identified association between the ID3 SNP rs11574 and carotid intima-media thickness in the Diabetes Heart Study, a predominantly White diabetic population. The nonsynonymous SNP rs11574 results in an amino acid substitution in the C-terminal region of ID3, attenuating the dominant negative function of ID3 as an inhibitor of basic HLH factor E12-mediated transcription. In the current investigation, we characterize the association between the functionally significant polymorphism in ID3, rs11574, with human coronary pathology. METHODS AND

resultsThe Multi-Ethnic Study of Atherosclerosis (MESA) is a longitudinal study of subclinical cardiovascular disease, including non-Hispanic White (n = 2,588), African American (n = 2,560) and Hispanic (n = 2,130) participants with data on coronary artery calcium (CAC). The Coronary Assessment in Virginia cohort (CAVA) included 71 patients aged 30-80 years, undergoing a medically necessary cardiac catheterization and intravascular ultrasound (IVUS) at the University of Virginia. ID3 SNP rs11574 risk allele was associated with the presence of CAC in MESA Whites (P = 0.017). In addition, the risk allele was associated with greater atheroma burden and stenosis in the CAVA cohort (P = 0.003, P = 0.04 respectively). The risk allele remained predictive of atheroma burden in multivariate analysis (Model 1: covariates age, gender, and LDL, regression coefficient = 9.578, SE = 3.657, p = 0.0110; Model 2: covariates Model 1, presence of hypertension, presence of diabetes, regression coefficient = 8.389, SE = 4.788, p = 0.0163).

conclusionsWe present additional cohorts that demonstrate association of ID3 SNP rs11574 directly with human coronary artery pathology as measured by CAC and IVUS: one a multiethnic, relatively healthy population with low levels of diabetes and the second a predominantly White population with a higher incidence of T2DM referred for cardiac catheterization.

Indexed as

Polymorphism, Single NucleotideAdultAgedAged, 80 and overAllelesBlack or African AmericanCoronary Artery DiseaseFemaleGene FrequencyGenetic Predisposition to DiseaseGenotypeHispanic or LatinoHumansInhibitor of Differentiation ProteinsLongitudinal StudiesMaleID3 protein, humanInhibitor of Differentiation ProteinsNeoplasm Proteins

Identifiers

PMID24603695
PMCPMC3946163
OpenAlexW2079604465

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.