Evidence map›Paper›PMID 24603659›Full record

ArticlePLoS pathogens2014

Evolution of the retroviral restriction gene Fv1: inhibition of non-MLV retroviruses.

Melvyn W Yap, Emily Colbeck, Scott A Ellis, Jonathan P Stoye

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 64 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Review
  5. Article
  6. The Lifespan ofInsects · 2024
    Article
  7. Article
  8. Article
  9. Review
  10. Review
  11. Domesticated LTR-RetrotransposonLife (Basel, Switzerland) · 2022
    Review
  12. Review
  13. Article
  14. Article
  15. Review
  16. Review
  17. Review
  18. Article
  19. DomesticatedGenes · 2020
    Article
  20. Convergent Co-option of the RetroviralJournal of virology · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Melvyn W YapDivision of Virology, National Institute for Medical Research, Mill Hill, London, United Kingdom.
Emily ColbeckDivision of Virology, National Institute for Medical Research, Mill Hill, London, United Kingdom.
Scott A EllisDivision of Virology, National Institute for Medical Research, Mill Hill, London, United Kingdom.
Jonathan P StoyeDivision of Virology, National Institute for Medical Research, Mill Hill, London, United Kingdom; Faculty of Medicine, Imperial College London, London, United Kingdom.
Imperial College London · GB

Funding

Medical Research Council MC_U117512710Medical Research Council U117512710
6 · The paper itself

Abstract

Fv1 is the prototypic restriction factor that protects against infection by the murine leukemia virus (MLV). It was first identified in cells that were derived from laboratory mice and was found to be homologous to the gag gene of an endogenous retrovirus (ERV). To understand the evolution of the host restriction gene from its retroviral origins, Fv1s from wild mice were isolated and characterized. Most of these possess intact open reading frames but not all restricted N-, B-, NR-or NB-tropic MLVs, suggesting that other viruses could have played a role in the selection of the gene. The Fv1s from Mus spretus and Mus caroli were found to restrict equine infectious anemia virus (EIAV) and feline foamy virus (FFV) respectively, indicating that Fv1 could have a broader target range than previously thought, including activity against lentiviruses and spumaviruses. Analyses of the Fv1 sequences revealed a number of residues in the C-terminal region that had evolved under positive selection. Four of these selected residues were found to be involved in the novel restriction by mapping studies. These results strengthen the similarities between the two capsid binding restriction factors, Fv1 and TRIM5α, which support the hypothesis that Fv1 defended mice against waves of retroviral infection possibly including non-MLVs as well as MLVs.

Indexed as

Biological EvolutionAnimalsBase SequenceMiceMolecular Sequence DataMutagenesis, Site-DirectedPhylogenyProteinsRetroviridaeRetroviridae InfectionsReverse Transcriptase Polymerase Chain ReactionFv1 protein, mouseProteins

Identifiers

PMID24603659
PMCPMC3948346
OpenAlexW1969516457

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.