Evidence map›Paper›PMID 24603549›Full record

ArticlePLoS genetics2014

Final pre-40S maturation depends on the functional integrity of the 60S subunit ribosomal protein L3.

Juan J García-Gómez, Antonio Fernández-Pevida, Simon Lebaron, Iván V Rosado, David Tollervey, Dieter Kressler, Jesús de la Cruz

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
4.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 61 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
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  5. Archaea/eukaryote-specific ribosomal proteins - guardians of a complex structure.Computational and structural biotechnology journal · 2023
    Review
  6. Article
  7. Review
  8. Article
  9. Ribosome Biogenesis and Cancer: Overview on Ribosomal Proteins.International journal of molecular sciences · 2021
    Review
  10. Article
  11. Article
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  13. Article
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  15. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 3 countries.

Juan J García-GómezDepartamento de Genética, Universidad de Sevilla, and Instituto de Biomedicina de Sevilla, Hospital Universitario Virgen del Rocío/CSIC/Universidad de Sevilla, Seville, Spain.
Antonio Fernández-PevidaDepartamento de Genética, Universidad de Sevilla, and Instituto de Biomedicina de Sevilla, Hospital Universitario Virgen del Rocío/CSIC/Universidad de Sevilla, Seville, Spain.
Simon LebaronWellcome Trust Centre for Cell Biology, University of Edinburgh, Edinburgh, United Kingdom.
Iván V RosadoDepartamento de Genética, Universidad de Sevilla, and Instituto de Biomedicina de Sevilla, Hospital Universitario Virgen del Rocío/CSIC/Universidad de Sevilla, Seville, Spain.
David TollerveyWellcome Trust Centre for Cell Biology, University of Edinburgh, Edinburgh, United Kingdom.
Dieter KresslerUnit of Biochemistry, Department of Biology, University of Fribourg, Fribourg, Switzerland.
Jesús de la CruzDepartamento de Genética, Universidad de Sevilla, and Instituto de Biomedicina de Sevilla, Hospital Universitario Virgen del Rocío/CSIC/Universidad de Sevilla, Seville, Spain.
Hospital Universitario Virgen del Rocío · ESInstituto de Biomedicina de Sevilla · ESUniversity of Edinburgh · GBUniversity of Fribourg · CHWellcome Centre for Cell Biology · GB

Funding

Wellcome Trust 077248Wellcome Trust 092076
6 · The paper itself

Abstract

Ribosomal protein L3 is an evolutionarily conserved protein that participates in the assembly of early pre-60S particles. We report that the rpl3[W255C] allele, which affects the affinity and function of translation elongation factors, impairs cytoplasmic maturation of 20S pre-rRNA. This was not seen for other mutations in or depletion of L3 or other 60S ribosomal proteins. Surprisingly, pre-40S particles containing 20S pre-rRNA form translation-competent 80S ribosomes, and translation inhibition partially suppresses 20S pre-rRNA accumulation. The GTP-dependent translation initiation factor Fun12 (yeast eIF5B) shows similar in vivo binding to ribosomal particles from wild-type and rpl3[W255C] cells. However, the GTPase activity of eIF5B failed to stimulate processing of 20S pre-rRNA when assayed with ribosomal particles purified from rpl3[W255C] cells. We conclude that L3 plays an important role in the function of eIF5B in stimulating 3' end processing of 18S rRNA in the context of 80S ribosomes that have not yet engaged in translation. These findings indicate that the correct conformation of the GTPase activation region is assessed in a quality control step during maturation of cytoplasmic pre-ribosomal particles.

Indexed as

AllelesCytoplasmEukaryotic Initiation FactorsMutationProteasome Endopeptidase ComplexProtein BindingRibosomal Protein L3Ribosomal ProteinsRibosome Subunits, Large, EukaryoticRibosome Subunits, Small, EukaryoticRNA PrecursorsRNA, Ribosomal, 18SSaccharomyces cerevisiaeeukaryotic initiation factor-5BEukaryotic Initiation FactorsProteasome Endopeptidase ComplexRibosomal Protein L3Ribosomal ProteinsRNA PrecursorsRNA, Ribosomal, 18S

Identifiers

PMID24603549
PMCPMC3945201
OpenAlexW2041983131

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.