Evidence map›Paper›PMID 24603050›Full record

ArticlePlant signaling & behavior2014

Deciphering the role of various cis-acting regulatory elements in controlling SamDC gene expression in rice.

Supratim Basu, Aryadeep Roychoudhury, Dibyendu N Sengupta

Open access · bronzeAbstract read
In one paragraph

Article in Plant signaling & behavior, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.4field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Advances in understanding salt tolerance in rice.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2019
    Review
  6. Article
  7. Article
  8. Stress-MediatedFrontiers in plant science · 2016
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 3 institutions in 2 countries.

Supratim BasuDepartment of Crop Soil and Environmental Sciences; University of Arkansas; Fayetteville, AR USA; Division of Plant Biology; Bose Institute; Kolkata, India.
Aryadeep RoychoudhuryPost Graduate Department of Biotechnology; St. Xavier's College (Autonomous); Kolkata, West Bengal, India.
Dibyendu N SenguptaDivision of Plant Biology; Bose Institute; Kolkata, India.
Bose Institute · INFayetteville Public Library · USSt Xavier’s College · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Lately we have published on the characterization of the upstream of SamDC gene from rice and investigated the involvement of various cis-elements present in the promoter region in its transcriptional regulation. Analysis of SamDC expression showed that it was inducible by abiotic stresses like salinity, drought, and cold as well as by light and ABA treatment. Furthermore, DNA protein interaction studies have identified transacting actors responsible for its expression after abiotic stresses or light inducibility. Here we have further discussed on the possible role of these cis-elements in modulating the transcriptional network and comment on their function in relation to polyamine biosynthesis during periods of abiotic stress in rice.

Indexed as

Gene Expression Regulation, PlantRegulatory Elements, TranscriptionalAbscisic AcidAdenosylmethionine DecarboxylaseOryzaPlant ProteinsStress, PhysiologicalAbscisic AcidAdenosylmethionine DecarboxylasePlant ProteinsABADroughtLightLow TemperaturePolyaminesSalinitySamDC

Identifiers

PMID24603050
PMCPMC4091577
OpenAlexW2073793923

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.