Evidence map›Paper›PMID 24601535›Full record

ArticleBiochemistry2014

Understanding the structural requirements for activators of the Kef bacterial potassium efflux system.

Jessica Healy, Silvia Ekkerman, Christos Pliotas, Morgiane Richard, Wendy Bartlett, Samuel C Grayer, Garrett M Morris, Samantha Miller, Ian R Booth, Stuart J Conway and 1 more

Abstract read
In one paragraph

Article in Biochemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

  1. Structure and mechanism of the KNature communications · 2024
    Article
  2. Review
  3. Review
  4. Isolation and Genomics ofMicrobiology spectrum · 2023
    Article
  5. Two Color Imaging of Different Hypoxia Levels in Cancer Cells.Journal of the American Chemical Society · 2023
    Article
  6. Article
  7. Parasitology · 2020
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. The photochemical thiol-ene reaction as a versatile method for the synthesis of glutathioneOrganic chemistry frontiers : an international journal of organic chemistry · 2016
    Article
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Jessica HealyDepartment of Chemistry, Chemistry Research Laboratory, University of Oxford , Mansfield Road, Oxford OX1 3TA, United Kingdom.
Silvia Ekkerman
Christos Pliotas
Morgiane Richard
Wendy Bartlett
Samuel C Grayer
Garrett M Morris
Samantha Miller
Ian R Booth
Stuart J Conway
Tim Rasmussen

Funding

Biotechnology and Biological Sciences Research Council BB/F003455/1Wellcome Trust WT092552MA
6 · The paper itself

Abstract

The potassium efflux system, Kef, protects bacteria against the detrimental effects of electrophilic compounds via acidification of the cytoplasm. Kef is inhibited by glutathione (GSH) but activated by glutathione-S-conjugates (GS-X) formed in the presence of electrophiles. GSH and GS-X bind to overlapping sites on Kef, which are located in a cytosolic regulatory domain. The central paradox of this activation mechanism is that GSH is abundant in cells (at concentrations of ∼10-20 mM), and thus, activating ligands must possess a high differential over GSH in their affinity for Kef. To investigate the structural requirements for binding of a ligand to Kef, a novel fluorescent reporter ligand, S-{[5-(dimethylamino)naphthalen-1-yl]sulfonylaminopropyl} glutathione (DNGSH), was synthesized. By competition assays using DNGSH, complemented by direct binding assays and thermal shift measurements, we show that the well-characterized Kef activator, N-ethylsuccinimido-S-glutathione, has a 10-20-fold higher affinity for Kef than GSH. In contrast, another native ligand that is a poor activator, S-lactoylglutathione, exhibits a similar Kef affinity to GSH. Synthetic ligands were synthesized to contain either rigid or flexible structures and investigated as ligands for Kef. Compounds with rigid structures and high affinity activated Kef. In contrast, flexible ligands with similar binding affinities did not activate Kef. These data provide insight into the structural requirements for Kef gating, paving the way for the development of a screen for potential therapeutic lead compounds targeting the Kef system.

Indexed as

Biological Transport, ActiveEscherichia coli ProteinsGlutathioneIon Channel GatingLigandsPotassiumPotassium-Hydrogen AntiportersProtein BindingProtein Structure, SecondaryProtein Structure, TertiaryShewanellaSuccinimidesEscherichia coli ProteinsGlutathionekefB protein, E coliLigandsN-ethylsuccinimido-S-glutathionePotassiumPotassium-Hydrogen AntiportersS-lactoylglutathioneSuccinimides

Identifiers

PMID24601535
PMCPMC4004266

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.