Evidence map›Paper›PMID 24599948›Full record

ArticleThe Journal of biological chemistry2014

Quantitative analysis of the chloroplast molecular chaperone ClpC/Hsp93 in Arabidopsis reveals new insights into its localization, interaction with the Clp proteolytic core, and functional importance.

Lars L E Sjögren, Noriaki Tanabe, Panagiotis Lymperopoulos, Nadir Z Khan, Steven R Rodermel, Henrik Aronsson, Adrian K Clarke

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 60 citations in OpenAlex.

  1. Review
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  8. Frontiers in plant science · 2021
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  11. Review
  12. Co-Suppression ofPlants (Basel, Switzerland) · 2020
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Lars L E SjögrenFrom the Department of Biological and Environmental Sciences, Gothenburg University, Box 461, 405 30 Gothenburg, Sweden and.
Noriaki TanabeFrom the Department of Biological and Environmental Sciences, Gothenburg University, Box 461, 405 30 Gothenburg, Sweden and.
Panagiotis LymperopoulosFrom the Department of Biological and Environmental Sciences, Gothenburg University, Box 461, 405 30 Gothenburg, Sweden and.
Nadir Z KhanFrom the Department of Biological and Environmental Sciences, Gothenburg University, Box 461, 405 30 Gothenburg, Sweden and.
Steven R Rodermelthe Department of Genetics, Development and Cell Biology, Iowa State University, Ames, Iowa 50011.
Henrik AronssonFrom the Department of Biological and Environmental Sciences, Gothenburg University, Box 461, 405 30 Gothenburg, Sweden and.
Adrian K ClarkeFrom the Department of Biological and Environmental Sciences, Gothenburg University, Box 461, 405 30 Gothenburg, Sweden and. Electronic address: adrian.clarke@bioenv.gu.se.
University of Gothenburg · SEIowa State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The molecular chaperone ClpC/Hsp93 is essential for chloroplast function in vascular plants. ClpC has long been held to act both independently and as the regulatory partner for the ATP-dependent Clp protease, and yet this and many other important characteristics remain unclear. In this study, we reveal that of the two near-identical ClpC paralogs (ClpC1 and ClpC2) in Arabidopsis chloroplasts, along with the closely related ClpD, it is ClpC1 that is the most abundant throughout leaf maturation. An unexpectedly large proportion of both chloroplast ClpC proteins (30% of total ClpC content) associates to envelope membranes in addition to their stromal localization. The Clp proteolytic core is also bound to envelope membranes, the amount of which is sufficient to bind to all the similarly localized ClpC. The role of such an envelope membrane Clp protease remains unclear although it appears uninvolved in preprotein processing or Tic subunit protein turnover. Within the stroma, the amount of oligomeric ClpC protein is less than that of the Clp proteolytic core, suggesting most if not all stromal ClpC functions as part of the Clp protease; a proposal supported by the near abolition of Clp degradation activity in the clpC1 knock-out mutant. Overall, ClpC appears to function primarily within the Clp protease, as the principle stromal protease responsible for maintaining homeostasis, and also on the envelope membrane where it possibly confers a novel protein quality control mechanism for chloroplast preprotein import.

Indexed as

ArabidopsisArabidopsis ProteinsChloroplast ProteinsChloroplastsGene Knockout TechniquesHeat-Shock ProteinsIntracellular MembranesPeptide HydrolasesProtein PrecursorsProteolysisArabidopsis ProteinsAT5G50920 protein, ArabidopsisChloroplast ProteinsHeat-Shock ProteinsPeptide HydrolasesProtein PrecursorsChloroplastMolecular ChaperoneProteaseProtein DegradationProtein Translocation

Identifiers

PMID24599948
PMCPMC4036269
OpenAlexW2019260822

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.