Evidence map›Paper›PMID 24599279›Full record

ArticleViruses2014

Development of lectin-linked immunomagnetic separation for the detection of hepatitis a virus.

Sang-Mu Ko, Joseph Kwon, Bipin Vaidya, Jong Soon Choi, Hee-Min Lee, Myung-Joo Oh, Hyeun-Jong Bae, Se-Young Cho, Kyung-Seo Oh, Duwoon Kim

Open access · goldAbstract read
In one paragraph

Article in Viruses, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 14 citations in OpenAlex.

  1. Review
  2. Plant lectins as prospective antiviral biomolecules in the search for COVID-19 eradication strategies.Biomedicine & pharmacotherapy = Biomedecine & pharmacotherapie · 2022
    Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Sang-Mu KoDepartment of Aqualife Medicine, Chonnam National University, Yeosu, Jeonnam 550-749, Korea. rhtkdan7@naver.com.
Joseph KwonKorea Basic Science Institute, Daejeon 305-806, Korea. joseph@kbsi.re.kr.
Bipin VaidyaDepartment of Food Science and Technology and Functional Food Research Center, Chonnam National University, Gwangju 500-757, Korea. bipinvaidya@hotmail.com.
Jong Soon ChoiKorea Basic Science Institute, Daejeon 305-806, Korea. jschoi@kbsi.re.kr.
Hee-Min LeeDepartment of Food Science and Technology and Functional Food Research Center, Chonnam National University, Gwangju 500-757, Korea. lhmein@naver.com.
Myung-Joo OhDepartment of Aqualife Medicine, Chonnam National University, Yeosu, Jeonnam 550-749, Korea. ohmj@jnu.ac.kr.
Hyeun-Jong BaeDepartment of Forest Products and Technology, Chonnam National University, Gwangju 500-757, Korea. baehj@jnu.ac.kr.
Se-Young ChoDepartment of Food Science and Technology and Functional Food Research Center, Chonnam National University, Gwangju 500-757, Korea. sycho5633@gmail.com.
Kyung-Seo OhDepartment of Food Science and Technology and Functional Food Research Center, Chonnam National University, Gwangju 500-757, Korea. oks665@naver.com.
Duwoon KimDepartment of Food Science and Technology and Functional Food Research Center, Chonnam National University, Gwangju 500-757, Korea. dwkim@jnu.ac.kr.
Chonnam National University · KRKorea Basic Science Institute · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The accuracy and sensitivity of PCR-based methods for detection of hepatitis A virus (HAV) are dependent on the methods used to separate and concentrate the HAV from the infected cells. The pH and ionic strength affect the binding affinity of the virus to cells. In this study, we initially investigated the effects of pH (4.0-10.0) and metal ions (Fe²⁺, Co²⁺, Cu²⁺, Mg²⁺, K⁺, and Ca²⁺) on the binding of HAV to oyster digestive cells. The lowest relative binding (RB) of HAV to the cells was found at pH 4.0 and in FeSO₄ solution (64.6% and 68.1%, respectively). To develop an alternative to antibody-dependent immunomagnetic separation prior to detection of HAV using RT-PCR, the binding of HAV to five lectins, peanut agglutinin (PNA), Dolichos biflorus agglutinin (DBA), Helix pomatia agglutinin (HPA), Ulex europaeus agglutinin (UEA-1) and soybean agglutinin (SBA), was evaluated using ELISAs. SBA showed significantly higher RB to HAV than the other lectins tested. In addition, HAV could be concentrated within 30 min using SBA-linked magnetic bead separation (SMS) prior to the RT-PCR assay. Our findings demonstrate the feasibility of using SMS combined with RT-PCR to detect HAV at dilutions ranging from 10⁻¹-10⁻⁴ of a HAV stock (titer: 10⁴ TCID₅₀/mL).

Indexed as

Hepatitis AHepatitis A virusHumansHydrogen-Ion ConcentrationImmunomagnetic SeparationLectinsMetalsReverse Transcriptase Polymerase Chain ReactionSpecimen HandlingTime FactorsVirus AttachmentLectinsMetals

Identifiers

PMID24599279
PMCPMC3970137
OpenAlexW2148793060

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.