Evidence map›Paper›PMID 24596090›Full record

ArticleThe Journal of biological chemistry2014

A proposed mechanism for the promotion of prion conversion involving a strictly conserved tyrosine residue in the β2-α2 loop of PrPC.

Timothy D Kurt, Lin Jiang, Cyrus Bett, David Eisenberg, Christina J Sigurdson

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
3.3field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 40 citations in OpenAlex.

  1. Intrinsic determinants of prion protein neurotoxicity inFrontiers in molecular neuroscience · 2023
    Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Journal of virology · 2017
    Article
  10. Article
  11. Prion proteinProceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  12. Toward the Atomic Structure of PrPCold Spring Harbor perspectives in biology · 2017
    Review
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Timothy D KurtDepartment of Pathology and Medicine, University of California San Diego, La Jolla, California 92093.
Lin JiangDepartment of Energy Institute for Genomics and Proteomics, Howard Hughes Medical Institute, and Molecular Biology Institute, UCLA, Los Angeles, California 90095.
Cyrus BettDepartment of Pathology and Medicine, University of California San Diego, La Jolla, California 92093.
David EisenbergDepartment of Energy Institute for Genomics and Proteomics, Howard Hughes Medical Institute, and Molecular Biology Institute, UCLA, Los Angeles, California 90095.
Christina J SigurdsonDepartment of Pathology and Medicine, University of California San Diego, La Jolla, California 92093; Department of Pathology, Immunology, and Microbiology, University of California, Davis, California 95616. Electronic address: csigurdson@ucsd.edu.
Howard Hughes Medical Institute · USUniversity of California, San Diego · USUniversity of California, Davis · US

Funding

Mechanisms of Prion Aggregation and Species BarriersR01NS069566 · NINDS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI ESKO, JEFFREY D, RAVITS, JOHN · 2011 to 2025
$5.7M
Structural Biology of Amyloid DiseaseR01AG029430 · NIA · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI EISENBERG, DAVID · 2007 to 2016
$3.9M
Mechanisms of Prion SpreadR01NS076896 · NINDS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI SIGURDSON, CHRISTINA · 2012 to 2021
$3.4M
Mechanisms of Prion Spread and Neuronal ToxicityR37NS076896 · NINDS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Christina Sigurdson · 2023 to 2026
$2.6M
UCSD Research Training Program for VeterinariansT32OD017863 · OD · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI ERNST, PETER B., SIGURDSON, CHRISTINA · 2014 to 2023
$2.0M
NIAID NIH HHS U54AI0359NIA NIH HHS AG029430NIA NIH HHS R01 AG029430NIH HHS T32 OD017863NINDS NIH HHS NS069566NINDS NIH HHS NS076896NINDS NIH HHS R01 NS069566NINDS NIH HHS R01 NS076896NINDS NIH HHS R37 NS076896
6 · The paper itself

Abstract

The transmission of infectious prions into different host species requires compatible prion protein (PrP) primary structures, and even one heterologous residue at a pivotal position can block prion infection. Mapping the key amino acid positions that govern cross-species prion conversion has not yet been possible, although certain residue positions have been identified as restrictive, including residues in the β2-α2 loop region of PrP. To further define how β2-α2 residues impact conversion, we investigated residue substitutions in PrP(C) using an in vitro prion conversion assay. Within the β2-α2 loop, a tyrosine residue at position 169 is strictly conserved among mammals, and transgenic mice expressing mouse PrP having the Y169G, S170N, and N174T substitutions resist prion infection. To better understand the structural requirements of specific residues for conversion initiated by mouse prions, we substituted a diverse array of amino acids at position 169 of PrP. We found that the substitution of glycine, leucine, or glutamine at position 169 reduced conversion by ∼ 75%. In contrast, replacing tyrosine 169 with either of the bulky, aromatic residues, phenylalanine or tryptophan, supported efficient prion conversion. We propose a model based on a requirement for tightly interdigitating complementary amino acid side chains within specific domains of adjacent PrP molecules, known as "steric zippers," to explain these results. Collectively, these studies suggest that an aromatic residue at position 169 supports efficient prion conversion.

Indexed as

AmyloidAnimalsCell-Free SystemMiceMutagenesis, Site-DirectedMutationNeurodegenerative DiseasesPrion DiseasesPrion ProteinsPrionsProtein BindingProtein Structure, TertiaryPrPC ProteinsTyrosineAmyloidPrion ProteinsPrionsPrnp protein, mousePrPC ProteinsTyrosineAmyloidInfectious DiseasesNeurodegenerative DiseasesPrionsProtein AggregationSteric ZipperTransmissible Spongiform EncephalopathyTSEβ2-α2 Loop

Identifiers

PMID24596090
PMCPMC4036184
OpenAlexW1987085254

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.