Evidence map›Paper›PMID 24596088›Full record

ArticleThe Journal of biological chemistry2014

Biophysical underpinnings of the repeat length dependence of polyglutamine amyloid formation.

Elizabeth Landrum, Ronald Wetzel

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed, 1 pooled it
2.5field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 1 synthesis or guideline pooled it, 39 citations in OpenAlex.

  1. Pooled it
  2. A tunable affinity fusion tag for protein self-assembly.bioRxiv : the preprint server for biology · 2025
    Article
  3. Article
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  5. Review
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  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. The Aggregation Free Energy Landscapes of Polyglutamine Repeats.Journal of the American Chemical Society · 2016
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Q&A: repeat-containing proteins.Nature structural & molecular biology · 2015
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Elizabeth LandrumDepartment of Structural Biology and the Pittsburgh Institute for Neurodegenerative Diseases, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania 15260.
Ronald WetzelDepartment of Structural Biology and the Pittsburgh Institute for Neurodegenerative Diseases, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania 15260. Electronic address: rwetzel@pitt.edu.
University of Pittsburgh · US

Funding

Structures and Properties of Polyglutamine Proteins and Their AggregatesR01AG019322 · NIA · UNIVERSITY OF TENNESSEE KNOXVILLE · PI WETZEL, RONALD B · 2001 to 2014
$4.6M
Mechanisms of amyloid nucleationR01GM099718 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI WETZEL, RONALD B · 2012 to 2015
$1.1M
NIA NIH HHS R01 AG019322NIGMS NIH HHS R01 GM099718
6 · The paper itself

Abstract

There are now 10 expanded CAG repeat diseases in which both disease risk and age of onset are strongly dependent on the repeat length of the polyglutamine (polyQ) sequence in the disease protein. Large, polyQ-rich inclusions in patient brains and in cell and animal models are consistent with the involvement of polyQ aggregation in the disease mechanism. This possibility is reinforced by studies showing strong repeat length dependence to the aggregation process, qualitatively mirroring the repeat length dependence of disease risk. Our understanding of the underlying biophysical principles that mediate the repeat length dependence of aggregation, however, is far from complete. A previous study of simple polyQ peptides showed that N*, the size of the critical nucleus that controls onset of aggregation, decreases from unfavorable tetramer to favorable monomer over the range Q23 to Q26. These data, however, do not explain why, for all peptides exhibiting N* ∼ 1, spontaneous aggregation rates continue to increase with increasing repeat length. Here we describe a novel kinetics analyses that maps out the nonlinear dependence with repeat length of a nucleation efficiency term that is likely related to aspects of nucleus structure. This trend accounts for why nucleus size increases to tetrameric at repeat lengths of Q23 or below. Intriguingly, both aggregation and age of onset trend with repeat length in similar ways, exhibiting large changes per added Gln at low repeat lengths and small changes per added Gln at relatively long repeat lengths. Fibril stability also increases with repeat length in a nonlinear fashion.

Indexed as

Trinucleotide RepeatsAge of OnsetAmyloidBiophysical PhenomenaHumansHuntington DiseaseKineticsPeptidesProtein ConformationTemperatureAmyloidPeptidespolyglutamineAmyloidHuntington DiseaseKineticsNucleationPolyglutamineProtein AggregationProtein StabilityRepeat Length

Identifiers

PMID24596088
PMCPMC4036150
OpenAlexW1996757196

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.