ArticleJournal of plant research2014
Analysis of the complete plastid genome of the unicellular red alga Porphyridium purpureum.
Article in Journal of plant research, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.
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25 citing papers in PubMed, 52 citations in OpenAlex.
- The structure of PSI-LHCI fromProceedings of the National Academy of Sciences of the United States of America · 2024Article
- Independent Size Expansions and Intron Proliferation in Red Algal Plastid and Mitochondrial Genomes.Genome biology and evolution · 2022Article
- Organellar Evolution: A Path from Benefit to Dependence.Microorganisms · 2022Review
- Group II intron and repeat-rich red algal mitochondrial genomes demonstrate the dynamic recent history of autocatalytic RNAs.BMC biology · 2022Article
- Are Cyanobacteria an Ancestor of Chloroplasts or Just One of the Gene Donors for Plants and Algae?Genes · 2021Article
- Noncoding RNA: An Insight into Chloroplast and Mitochondrial Gene Expressions.Life (Basel, Switzerland) · 2021Review
- Article
- The first plastid genome of a filamentous taxon 'Bangia' sp. OUCPT-01 in the Bangiales.Scientific reports · 2018Article
- Characterization of the complete plastid genome ofMitochondrial DNA. Part B, Resources · 2017Article
- Evolutionary Dynamics of Cryptophyte Plastid Genomes.Genome biology and evolution · 2017Article
- Origin and evolutionary history of freshwater Rhodophyta: further insights based on phylogenomic evidence.Scientific reports · 2017Article
- Lipid metabolism and potentials of biofuel and high added-value oil production in red algae.World journal of microbiology & biotechnology · 2017Review
- Complete chloroplast genome of Gracilaria firma (Gracilariaceae, Rhodophyta), with discussion on the use of chloroplast phylogenomics in the subclass Rhodymeniophycidae.BMC genomics · 2017Article
- Sequencing and analysis of the complete organellar genomes of Parmales, a closely related group to Bacillariophyta (diatoms).Current genetics · 2016Article
- Parallel evolution of highly conserved plastid genome architecture in red seaweeds and seed plants.BMC biology · 2016Article
- Identification of conserved and novel microRNAs in Porphyridium purpureum via deep sequencing and bioinformatics.BMC genomics · 2016Article
- Reconstructing the complex evolutionary history of mobile plasmids in red algal genomes.Scientific reports · 2016Article
- Article
- Diversity in Biosynthetic Pathways of Galactolipids in the Light of Endosymbiotic Origin of Chloroplasts.Frontiers in plant science · 2016Review
- Updating algal evolutionary relationships through plastid genome sequencing: did alveolate plastids emerge through endosymbiosis of an ochrophyte?Scientific reports · 2015Article
Corrections and comments
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Authors and funding
9 authors at 7 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
We determined the complete nucleotide sequence of the plastid genome of the unicellular marine red alga Porphyridium purpureum strain NIES 2140, belonging to the unsequenced class Porphyridiophyceae. The genome is a circular DNA composed of 217,694 bp with the GC content of 30.3%. Twenty-nine of the 224 protein-coding genes contain one or multiple intron(s). A group I intron was found in the rpl28 gene, whereas the other introns were group II introns. The P. purpureum plastid genome has one non-coding RNA (ncRNA) gene, 29 tRNA genes and two nonidentical ribosomal RNA operons. One rRNA operon has a tRNA(Ala)(UGC) gene between the rrs and the rrl genes, whereas another has a tRNA(Ile)(GAU) gene. Phylogenetic analyses suggest that the plastids of Heterokontophyta, Cryptophyta and Haptophyta originated from the subphylum Rhodophytina. The order of the genes in the ribosomal protein cluster of the P. purpureum plastid genome differs from that of other Rhodophyta and Chromalveolata. These results suggest that a large-scale rearrangement occurred in the plastid genome of P. purpureum after its separation from other Rhodophyta.
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