Evidence map›Paper›PMID 24595351›Full record

ArticleDiabetes2014

Risk of type 1 diabetes progression in islet autoantibody-positive children can be further stratified using expression patterns of multiple genes implicated in peripheral blood lymphocyte activation and function.

Yulan Jin, Ashok Sharma, Shan Bai, Colleen Davis, Haitao Liu, Diane Hopkins, Kathy Barriga, Marian Rewers, Jin-Xiong She

Open access · bronzeAbstract read
In one paragraph

Article in Diabetes, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed, 1 pooled it
4.0field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 1 synthesis or guideline pooled it, 35 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Article
  4. Proteomic profiling of eIF3a conditional knockout mice.Frontiers in molecular biosciences · 2023
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  14. Serum biomarkers for diagnosis and prediction of type 1 diabetes.Translational research : the journal of laboratory and clinical medicine · 2018
    Review
  15. Article
  16. Early life origin of type 1 diabetes.Seminars in immunopathology · 2017
    Review
  17. Article
  18. Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Yulan JinSino-American Institute of Translational Medicine, School of Pharmaceutical Sciences, Nanjing University of Technology, Nanjing, ChinaCenter for Biotechnology and Genomic Medicine, Medical College of Georgia, Georgia Regents University, Augusta, GADepartment of Pathology, Medical College of Georgia, Georgia Regents University, Augusta, GA.
Ashok SharmaCenter for Biotechnology and Genomic Medicine, Medical College of Georgia, Georgia Regents University, Augusta, GADepartment of Pathology, Medical College of Georgia, Georgia Regents University, Augusta, GA.
Shan BaiCenter for Biotechnology and Genomic Medicine, Medical College of Georgia, Georgia Regents University, Augusta, GA.
Colleen DavisCenter for Biotechnology and Genomic Medicine, Medical College of Georgia, Georgia Regents University, Augusta, GA.
Haitao LiuSino-American Institute of Translational Medicine, School of Pharmaceutical Sciences, Nanjing University of Technology, Nanjing, ChinaCenter for Biotechnology and Genomic Medicine, Medical College of Georgia, Georgia Regents University, Augusta, GA.
Diane HopkinsCenter for Biotechnology and Genomic Medicine, Medical College of Georgia, Georgia Regents University, Augusta, GA.
Kathy BarrigaBarbara Davis Center for Childhood Diabetes, Aurora, CO.
Marian RewersBarbara Davis Center for Childhood Diabetes, Aurora, CO jshe@gru.edu marian.rewers@ucdenver.edu.
Jin-Xiong SheSino-American Institute of Translational Medicine, School of Pharmaceutical Sciences, Nanjing University of Technology, Nanjing, ChinaCenter for Biotechnology and Genomic Medicine, Medical College of Georgia, Georgia Regents University, Augusta, GADepartment of Pathology, Medical College of Georgia, Georgia Regents University, Augusta, GA jshe@gru.edu marian.rewers@ucdenver.edu.
Augusta University · USNanjing Tech University · CN

Funding

Natural History of Pre-Diabetic Autoimmunity (DAISY)R01DK032493 · NIDDK · UNIVERSITY OF COLORADO DENVER · PI REWERS, MARIAN J · 1986 to 2024
$9.3M
Natural History of Pre-diabetic Autoimmunity (DAISY)R37DK032493 · NIDDK · UNIVERSITY OF COLORADO DENVER · PI REWERS, MARIAN J · 2001 to 2010
$8.0M
Multiple Autoantigens/Multiple Epitopes of Type 1DMR01DK032083 · NIDDK · UNIVERSITY OF COLORADO DENVER · PI MICHELS, AARON W · 1986 to 2025
$6.9M
Studies of the Immunopathogenesis of Type 1 DiabetesR01HD037800 · NICHD · UNIVERSITY OF FLORIDA · PI SHE, JIN-XIONG · 1999 to 2006
$4.6M
GENETIC AND ENVIRONMENTAL CAUSES OF CELIAC DISEASER01DK050979 · NIDDK · UNIVERSITY OF COLORADO DENVER · PI REWERS, MARIAN J · 1995 to 2014
$4.0M
Development of microarray-based biomarkers for type 1 diR33DK069878 · NIDDK · AUGUSTA UNIVERSITY · PI SHE, JIN-XIONG · 2006 to 2008
$1.1M
Development of microarray-based biomarkers for type 1 diR21DK069878 · NIDDK · MEDICAL COLLEGE OF GEORGIA (MCG) · PI SHE, JIN-XIONG · 2004 to 2005
$733k
NICHD NIH HHS R01 HD037800NIDDK NIH HHS DK-32493NIDDK NIH HHS R01 DK032083NIDDK NIH HHS R01 DK032493NIDDK NIH HHS R01 DK050979NIDDK NIH HHS R01-DK-050979NIDDK NIH HHS R01-DK-32083NIDDK NIH HHS R21 DK069878NIDDK NIH HHS R33 DK069878NIDDK NIH HHS R37 DK032493
6 · The paper itself

Abstract

There is tremendous scientific and clinical value to further improving the predictive power of autoantibodies because autoantibody-positive (AbP) children have heterogeneous rates of progression to clinical diabetes. This study explored the potential of gene expression profiles as biomarkers for risk stratification among 104 AbP subjects from the Diabetes Autoimmunity Study in the Young (DAISY) using a discovery data set based on microarray and a validation data set based on real-time RT-PCR. The microarray data identified 454 candidate genes with expression levels associated with various type 1 diabetes (T1D) progression rates. RT-PCR analyses of the top-27 candidate genes confirmed 5 genes (BACH2, IGLL3, EIF3A, CDC20, and TXNDC5) associated with differential progression and implicated in lymphocyte activation and function. Multivariate analyses of these five genes in the discovery and validation data sets identified and confirmed four multigene models (BI, ICE, BICE, and BITE, with each letter representing a gene) that consistently stratify high- and low-risk subsets of AbP subjects with hazard ratios >6 (P < 0.01). The results suggest that these genes may be involved in T1D pathogenesis and potentially serve as excellent gene expression biomarkers to predict the risk of progression to clinical diabetes for AbP subjects.

Indexed as

AdolescentAdultAutoantibodiesChildChild, PreschoolCohort StudiesDiabetes Mellitus, Type 1Disease ProgressionFemaleGene Expression ProfilingHumansInfantIslets of LangerhansLymphocyte ActivationLymphocytesMaleAutoantibodies

Identifiers

PMID24595351
PMCPMC4066338
OpenAlexW2098899964

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.