Evidence map›Paper›PMID 24595271›Full record

ArticlePloS one2014

NEIL2 protects against oxidative DNA damage induced by sidestream smoke in human cells.

Altaf H Sarker, Arpita Chatterjee, Monique Williams, Sabrina Lin, Christopher Havel, Peyton Jacob, Istvan Boldogh, Tapas K Hazra, Prudence Talbot, Bo Hang

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 44 citations in OpenAlex.

  1. Article
  2. Article
  3. Research progress on the role of the NEIL family in cancer.Frontiers in cell and developmental biology · 2025
    Review
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. DNA glycosylase NEIL2 functions in multiple cellular processes.Progress in biophysics and molecular biology · 2021
    Review
  10. Genes · 2021
    Article
  11. Article
  12. The Journal of biological chemistry · 2020
    Article
  13. Review
  14. Article
  15. Thirdhand smoke: Genotoxicity and carcinogenic potential.Chronic diseases and translational medicine · 2020
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Altaf H SarkerDepartment of Cancer & DNA Damage Responses, Life Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America.
Arpita ChatterjeeDivision of Pulmonary and Critical Care Medicine, University of Texas Medical Branch, Galveston, Texas, United States of America.
Monique WilliamsDepartment of Cell Biology & Neuroscience, University of California Riverside, Riverside, California, United States of America.
Sabrina LinDepartment of Cell Biology & Neuroscience, University of California Riverside, Riverside, California, United States of America.
Christopher HavelDepartment of Medicine, University of California San Francisco, San Francisco General Hospital Medical Center, San Francisco, California, United States of America.
Peyton JacobDepartment of Medicine, University of California San Francisco, San Francisco General Hospital Medical Center, San Francisco, California, United States of America.
Istvan BoldoghDivision of Pulmonary and Critical Care Medicine, University of Texas Medical Branch, Galveston, Texas, United States of America.
Tapas K HazraDivision of Pulmonary and Critical Care Medicine, University of Texas Medical Branch, Galveston, Texas, United States of America.
Prudence TalbotDepartment of Cell Biology & Neuroscience, University of California Riverside, Riverside, California, United States of America.
Bo HangDepartment of Cancer & DNA Damage Responses, Life Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America.
The University of Texas Medical Branch at Galveston · USUniversity of California, Riverside · USLawrence Berkeley National Laboratory · USUniversity of California, San Francisco · US

Funding

Transcription-Coupled & Replication-Associated Excision RepairP01CA092584 · NCI · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI John A. Tainer · 2001 to 2026
$89.6M
Research Support CoreP30DA012393 · NIDA · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI ST.HELEN, GIDEON · 1999 to 2024
$17.1M
Mechanisms for Transcription-Coupled Repair in Human CellsR01CA063503 · NCI · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI COOPER, PRISCILLA K. · 1994 to 2010
$3.9M
Liquid Chromatograph-Triple Quadrupole Mass SpectrometerS10RR026437 · NCRR · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI JACOB, PEYTON · 2010 to 2010
$448k
NCI NIH HHS CA092584NCI NIH HHS CA63503NCI NIH HHS P01 CA092584NCI NIH HHS R01 CA063503NCRR NIH HHS S10 RR026437NIDA NIH HHS P30 DA012393
6 · The paper itself

Abstract

Secondhand smoke (SHS) is a confirmed lung carcinogen that introduces thousands of toxic chemicals into the lungs. SHS contains chemicals that have been implicated in causing oxidative DNA damage in the airway epithelium. Although DNA repair is considered a key defensive mechanism against various environmental attacks, such as cigarette smoking, the associations of individual repair enzymes with susceptibility to lung cancer are largely unknown. This study investigated the role of NEIL2, a DNA glycosylase excising oxidative base lesions, in human lung cells treated with sidestream smoke (SSS), the main component of SHS. To do so, we generated NEIL2 knockdown cells using siRNA-technology and exposed them to SSS-laden medium. Representative SSS chemical compounds in the medium were analyzed by mass spectrometry. An increased production of reactive oxygen species (ROS) in SSS-exposed cells was detected through the fluorescent detection and the induction of HIF-1α. The long amplicon-quantitative PCR (LA-QPCR) assay detected significant dose-dependent increases of oxidative DNA damage in the HPRT gene of cultured human pulmonary fibroblasts (hPF) and BEAS-2B epithelial cells exposed to SSS for 24 h. These data suggest that SSS exposure increased oxidative stress, which could contribute to SSS-mediated toxicity. siRNA knockdown of NEIL2 in hPF and HEK 293 cells exposed to SSS for 24 h resulted in significantly more oxidative DNA damage in HPRT and POLB than in cells with control siRNA. Taken together, our data strongly suggest that decreased repair of oxidative DNA base lesions due to an impaired NEIL2 expression in non-smokers exposed to SSS would lead to accumulation of mutations in genomic DNA of lung cells over time, thus contributing to the onset of SSS-induced lung cancer.

Indexed as

DNA DamageOxidative StressBase SequenceCell LineCulture MediaDNA-(Apurinic or Apyrimidinic Site) LyaseDNA GlycosylasesHumansHypoxanthine PhosphoribosyltransferaseHypoxia-Inducible Factor 1, alpha SubunitLungLung NeoplasmsReactive Oxygen SpeciesRNA, Small InterferingSmokeCulture MediaDNA-(Apurinic or Apyrimidinic Site) LyaseDNA GlycosylasesHIF1A protein, humanHypoxanthine PhosphoribosyltransferaseHypoxia-Inducible Factor 1, alpha SubunitNEIL2 protein, humanReactive Oxygen SpeciesRNA, Small InterferingSmoke

Identifiers

PMID24595271
PMCPMC3945017
OpenAlexW2010426936

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.