Evidence map›Paper›PMID 24595057›Full record

ArticlePloS one2014

Arabidopsis protein phosphatase DBP1 nucleates a protein network with a role in regulating plant defense.

José Luis Carrasco, María José Castelló, Kai Naumann, Ines Lassowskat, Marisa Navarrete-Gómez, Dierk Scheel, Pablo Vera

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
5.1field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 34 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Mapping of CaPP2C35 involved in the formation of light-green immature pepper (Capsicum annuum L.) fruits via GWAS and BSA.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022
    Article
  5. The Role of ABA in Plant Immunity is Mediated through the PYR1 Receptor.International journal of molecular sciences · 2020
    Article
  6. Article
  7. Review
  8. Nuclear Signaling of Plant MAPKs.Frontiers in plant science · 2018
    Review
  9. Article
  10. Review
  11. Review
  12. 14-3-3 Proteins in Guard Cell Signaling.Frontiers in plant science · 2015
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

José Luis CarrascoInstituto de Biología Molecular y Celular de Plantas, Universidad Politécnica de Valencia-C.S.I.C, Ciudad Politécnica de la Innovación, Valencia, Spain.
María José CastellóInstituto de Biología Molecular y Celular de Plantas, Universidad Politécnica de Valencia-C.S.I.C, Ciudad Politécnica de la Innovación, Valencia, Spain.
Kai NaumannDepartment of Stress and Developmental Biology, Leibniz Institute of Plant Biochemistry, Halle, Germany.
Ines LassowskatDepartment of Stress and Developmental Biology, Leibniz Institute of Plant Biochemistry, Halle, Germany.
Marisa Navarrete-GómezInstituto de Biología Molecular y Celular de Plantas, Universidad Politécnica de Valencia-C.S.I.C, Ciudad Politécnica de la Innovación, Valencia, Spain.
Dierk ScheelDepartment of Stress and Developmental Biology, Leibniz Institute of Plant Biochemistry, Halle, Germany.
Pablo VeraInstituto de Biología Molecular y Celular de Plantas, Universidad Politécnica de Valencia-C.S.I.C, Ciudad Politécnica de la Innovación, Valencia, Spain; Department of Stress and Developmental Biology, Leibniz Institute of Plant Biochemistry, Halle, Germany.
Leibniz Institute of Plant Biochemistry · DEUniversitat Politècnica de València · ESInstituto de Biología Molecular y Celular de Plantas · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Arabidopsis thaliana DBP1 belongs to the plant-specific family of DNA-binding protein phosphatases. Although recently identified as a novel host factor mediating susceptibility to potyvirus, little is known about DBP1 targets and partners and the molecular mechanisms underlying its function. Analyzing changes in the phosphoproteome of a loss-of-function dbp1 mutant enabled the identification of 14-3-3λ isoform (GRF6), a previously reported DBP1 interactor, and MAP kinase (MAPK) MPK11 as components of a small protein network nucleated by DBP1, in which GRF6 stability is modulated by MPK11 through phosphorylation, while DBP1 in turn negatively regulates MPK11 activity. Interestingly, grf6 and mpk11 loss-of-function mutants showed altered response to infection by the potyvirus Plum pox virus (PPV), and the described molecular mechanism controlling GRF6 stability was recapitulated upon PPV infection. These results not only contribute to a better knowledge of the biology of DBP factors, but also of MAPK signalling in plants, with the identification of GRF6 as a likely MPK11 substrate and of DBP1 as a protein phosphatase regulating MPK11 activity, and unveils the implication of this protein module in the response to PPV infection in Arabidopsis.

Indexed as

Host-Pathogen InteractionsProtein Interaction Maps14-3-3 ProteinsArabidopsisArabidopsis ProteinsDNA-Binding ProteinsGene Expression Regulation, PlantMitogen-Activated Protein KinasesMutationPhosphoprotein PhosphatasesPhosphoproteinsPhosphorylationPlant DiseasesPotyvirus14-3-3 ProteinsAFT1 protein, ArabidopsisArabidopsis ProteinsDBP1 protein, ArabidopsisDNA-Binding ProteinsMitogen-Activated Protein KinasesMPK11 protein, ArabidopsisPhosphoprotein PhosphatasesPhosphoproteins

Identifiers

PMID24595057
PMCPMC3942490
OpenAlexW2008521724

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.