Evidence map›Paper›PMID 24594375›Full record

ArticleNeuromuscular disorders : NMD2014

Exome sequencing identifies a DNAJB6 mutation in a family with dominantly-inherited limb-girdle muscular dystrophy.

Julien Couthouis, Alya R Raphael, Carly Siskind, Andrew R Findlay, Jason D Buenrostro, William J Greenleaf, Hannes Vogel, John W Day, Kevin M Flanigan, Aaron D Gitler

Open access · greenAbstract read
In one paragraph

Article in Neuromuscular disorders : NMD, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 41 citations in OpenAlex.

  1. Article
  2. DNAJB6: A guardian against neurodegeneration.Neural regeneration research · 2026
    Article
  3. Review
  4. LGMDD1 natural history and phenotypic spectrum: Implications for clinical trials.Annals of clinical and translational neurology · 2023
    Observational
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. LGMD1D myopathy with cytoplasmic and nuclear inclusions in a Saudi family due to DNAJB6 mutation.Acta myologica : myopathies and cardiomyopathies : official journal of the Mediterranean Society of Myology · 2018
    Article
  13. Article
  14. Article
  15. Granulostasis: Protein Quality Control of RNP Granules.Frontiers in molecular neuroscience · 2017
    Review
  16. Article
  17. Review
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Julien CouthouisDepartment of Genetics, Stanford University School of Medicine, Stanford, CA, USA.
Alya R RaphaelDepartment of Genetics, Stanford University School of Medicine, Stanford, CA, USA.
Carly SiskindNeuroscience Center, Stanford Hospital and Clinics, Stanford, CA, USA.
Andrew R FindlayDepartment of Neurology, The Ohio State University, Columbus, OH, USA.
Jason D BuenrostroDepartment of Genetics, Stanford University School of Medicine, Stanford, CA, USA.
William J GreenleafDepartment of Genetics, Stanford University School of Medicine, Stanford, CA, USA.
Hannes VogelDepartments of Pathology, Stanford University School of Medicine, Stanford, CA, USA; Departments of Pediatrics, Stanford University School of Medicine, Stanford, CA, USA.
John W DayDepartment of Neurology, Stanford University School of Medicine, Stanford, CA, USA.
Kevin M FlaniganDepartment of Neurology, The Ohio State University, Columbus, OH, USA; Department of Pediatrics, The Ohio State University, Columbus, OH, USA; Center for Gene Therapy, Nationwide Children's Hospital, Columbus, OH, USA.
Aaron D GitlerDepartment of Genetics, Stanford University School of Medicine, Stanford, CA, USA. Electronic address: agitler@stanford.edu.
Stanford University · USThe Ohio State University · USStanford Health Care · US

Funding

INSTITUTIONAL TRAINING GRANT IN GENOME SCIENCET32HG000044 · NHGRI · STANFORD UNIVERSITY · PI MICHAEL P. SNYDER · 1995 to 2026
$32.2M
Molecular Basis of TDP-43 Proteinopathies: Disease Models and MechanismsR01NS065317 · NINDS · UNIVERSITY OF PENNSYLVANIA · PI GITLER, AARON D. · 2009 to 2016
$2.7M
Using yeast cells to define mechanisms of human neurodegenerative diseasesDP2OD004417 · OD · UNIVERSITY OF PENNSYLVANIA · PI GITLER, AARON D. · 2008 to 2008
$2.4M
Ataxin-2 as a genetic risk factor for ALS: New insights into neurodegenerationR01NS073660 · NINDS · UNIVERSITY OF PENNSYLVANIA · PI BONINI, NANCY M, GITLER, AARON D. · 2011 to 2015
$1.7M
NHGRI NIH HHS T32 HG000044NIH HHS DP2 OD004417NINDS NIH HHS NS065317NINDS NIH HHS NS073660NINDS NIH HHS R01 NS065317NINDS NIH HHS R01 NS073660
6 · The paper itself

Abstract

Limb-girdle muscular dystrophy primarily affects the muscles of the hips and shoulders (the "limb-girdle" muscles), although it is a heterogeneous disorder that can present with varying symptoms. There is currently no cure. We sought to identify the genetic basis of limb-girdle muscular dystrophy type 1 in an American family of Northern European descent using exome sequencing. Exome sequencing was performed on DNA samples from two affected siblings and one unaffected sibling and resulted in the identification of eleven candidate mutations that co-segregated with the disease. Notably, this list included a previously reported mutation in DNAJB6, p.Phe89Ile, which was recently identified as a cause of limb-girdle muscular dystrophy type 1D. Additional family members were Sanger sequenced and the mutation in DNAJB6 was only found in affected individuals. Subsequent haplotype analysis indicated that this DNAJB6 p.Phe89Ile mutation likely arose independently of the previously reported mutation. Since other published mutations are located close by in the G/F domain of DNAJB6, this suggests that the area may represent a mutational hotspot. Exome sequencing provided an unbiased and effective method for identifying the genetic etiology of limb-girdle muscular dystrophy type 1 in a previously genetically uncharacterized family. This work further confirms the causative role of DNAJB6 mutations in limb-girdle muscular dystrophy type 1D.

Indexed as

FamilyMutationAdultDNA Mutational AnalysisExomeFemaleHaplotypesHSP40 Heat-Shock ProteinsHumansMaleMiddle AgedMolecular ChaperonesMuscle, SkeletalMuscular Dystrophies, Limb-GirdleNerve Tissue ProteinsPedigreeDNAJB6 protein, humanHSP40 Heat-Shock ProteinsMolecular ChaperonesNerve Tissue ProteinsDNAJB6Exome sequencingLimb-girdle muscular dystrophy

Identifiers

PMID24594375
PMCPMC4013999
OpenAlexW2156235086

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.