Evidence map›Paper›PMID 24592134›Full record

ArticleContemporary oncology (Poznan, Poland)2013

The analysis of ALK gene rearrangement by fluorescence in situ hybridization in non-small cell lung cancer patients.

Kamila Wojas-Krawczyk, Paweł Adam Krawczyk, Rodryg Adam Ramlau, Justyna Szumiło, Jerzy Kozielski, Ewa Kalinka-Warzocha, Maciej Bryl, Alina Knopik-Dąbrowicz, Lukasz Spychalski, Aleksandra Szczęsna and 2 more

Open access · goldAbstract read
In one paragraph

Article in Contemporary oncology (Poznan, Poland), 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.2field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 5 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Kamila Wojas-KrawczykDepartment of Pneumonology, Oncology and Allergology, Medical University of Lublin, Poland.
Paweł Adam KrawczykDepartment of Pneumonology, Oncology and Allergology, Medical University of Lublin, Poland.
Rodryg Adam RamlauWielkopolska Center of Pulmonology and Thoracosurgery, Poznan, Poland.
Justyna SzumiłoDepartment of Clinical Pathomorphology, Medical University of Lublin, Poland.
Jerzy KozielskiAutonomous Public Clinical Hospital No. 3, Medical University of Silesia, Katowice, Poland.
Ewa Kalinka-WarzochaDepartment of Chemotherapy with Division of Cancer Diagnosis and Treatment, Copernicus Memorial Hospital in Lodz, Regional Oncology Center, Lodz, Poland.
Maciej BrylWielkopolska Center of Pulmonology and Thoracosurgery, Poznan, Poland.
Alina Knopik-DąbrowiczDepartment of Pathomorphology, Dr. Władysław Biegański Regional Specialist Hospital, Lodz, Poland.
Lukasz SpychalskiWielkopolska Center of Pulmonology and Thoracosurgery, Poznan, Poland.
Aleksandra Szczęsna3 Department of Lung Diseases, Oncological Division, Mazovian Centre for Treatment of Lung Diseases and Tuberculosis, Otwock, Poland.
Ewelina RydzikDepartment of Pneumonology, Oncology and Allergology, Medical University of Lublin, Poland.
Janusz MilanowskiDepartment of Pneumonology, Oncology and Allergology, Medical University of Lublin, Poland.
Medical University of Lublin · PLCopernicus Memorial Hospital · PLMedical University of Silesia · PL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

introductionALK gene rearrangement is observed in a small subset (3-7%) of non-small cell lung cancer (NSCLC) patients. The efficacy of crizotinib was shown in lung cancer patients harbouring ALK rearrangement. Nowadays, the analysis of ALK gene rearrangement is added to molecular examination of predictive factors. AIM OF THE STUDY: The frequency of ALK gene rearrangement as well as the type of its irregularity was analysed by fluorescence in situ hybridisation (FISH) in tissue samples from NSCLC patients. MATERIAL AND

methodsThe ALK gene rearrangement was analysed in 71 samples including 53 histological and 18 cytological samples. The analysis could be performed in 56 cases (78.87%), significantly more frequently in histological than in cytological materials. The encountered problem with ALK rearrangement diagnosis resulted from the scarcity of tumour cells in cytological samples, high background fluorescence noises and fragmentation of cell nuclei.

resultsThe normal ALK copy number without gene rearrangement was observed in 26 (36.62%) patients ALK gene polysomy without gene rearrangement was observed in 25 (35.21%) samples while in 3 (4.23%) samples ALK gene amplification was found. ALK gene rearrangement was observed in 2 (2.82%) samples from males, while in the first case the rearrangement coexisted with ALK amplification. In the second case, signet-ring tumour cells were found during histopathological examination and this patient was successfully treated with crizotinib with partial remission lasting 16 months.

conclusionsFISH is a useful technique for ALK gene rearrangement analysis which allows us to specify the type of gene irregularities. ALK gene examination could be performed in histological as well as cytological (cellblocks) samples, but obtaining a reliable result in cytological samples depends on the cellularity of examined materials.

Indexed as

ALK gene rearrangementcrizotinibfluorescence in situ hybridizationnon-small cell lung cancer

Identifiers

PMID24592134
PMCPMC3934043
OpenAlexW2136442290

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.