Evidence map›Paper›PMID 24591725›Full record

ArticlePhilosophical transactions of the Royal Society of London. Series B, Biological sciences2014

Kinetics of retrograde signalling initiation in the high light response of Arabidopsis thaliana.

Khalid Alsharafa, Marc Oliver Vogel, Marie-Luise Oelze, Marten Moore, Nadja Stingl, Katharina König, Haya Friedman, Martin J Mueller, Karl-Josef Dietz

Abstract readComparative Study
In one paragraph

Article in Philosophical transactions of the Royal Society of London. Series B, Biological sciences, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Linking mitochondrial and chloroplast retrograde signalling in plants.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2020
    Review
  9. Photosynthetic signalling during high light stress and recovery: targets and dynamics.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2020
    Article
  10. Carbon export from leaves is controlled via ubiquitination and phosphorylation of sucrose transporter SUC2.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  11. Review
  12. Review
  13. Article
  14. Article
  15. Article
  16. Interaction between photosynthetic electron transport and chloroplast sinks triggers protection and signalling important for plant productivity.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2017
    Article
  17. Article
  18. Changing the light environment: chloroplast signalling and response mechanisms.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2014
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Khalid AlsharafaBiochemistry and Physiology of Plants, Bielefeld University, , Bielefeld 33501, Germany.
Marc Oliver Vogel
Marie-Luise Oelze
Marten Moore
Nadja Stingl
Katharina König
Haya Friedman
Martin J Mueller
Karl-Josef Dietz

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

High light acclimation depends on retrograde control of nuclear gene expression. Retrograde regulation uses multiple signalling pathways and thus exploits signal patterns. To maximally challenge the acclimation system, Arabidopsis thaliana plants were either adapted to 8 (low light (L-light)) or 80 µmol quanta m(-2) s(-1) (normal light (N-light)) and subsequently exposed to a 100- and 10-fold light intensity increase, respectively, to high light (H-light, 800 µmol quanta m(-2) s(-1)), for up to 6 h. Both L → H- and N → H-light plants efficiently regulated CO2 assimilation to a constant level without apparent damage and inhibition. This experimental set-up was scrutinized for time-dependent regulation and efficiency of adjustment. Transcriptome profiles revealed that N-light and L-light plants differentially accumulated 2119 transcripts. After 6 h in H-light, only 205 remained differently regulated between the L → H- and N → H-light plants, indicating efficient regulation allowing the plants to reach a similar transcriptome state. Time-dependent analysis of transcripts as markers for signalling pathways, and of metabolites and hormones as possibly involved transmitters, suggests that oxylipins such as oxophytodienoic acid and jasmonic acid, metabolites and redox cues predominantly control the acclimation response, whereas abscisic acid, salicylic acid and auxins play an insignificant or minor role.

Indexed as

LightAbscisic AcidAcclimatizationArabidopsisGene Expression ProfilingGene Expression Regulation, PlantIndoleacetic AcidsKineticsMicroarray AnalysisOxylipinsPhotic StimulationSalicylic AcidSignal TransductionTime FactorsAbscisic Acidindoleacetic acidIndoleacetic AcidsOxylipinsSalicylic Acidoxylipinphotosynthesisredox regulationretrograde signallingtranscript profiling

Identifiers

PMID24591725
PMCPMC3949403

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.