ArticleTheScientificWorldJournal2014
Molecular divergence and species delimitation of the cultivated oyster mushrooms: integration of IGS1 and ITS.
Article in TheScientificWorldJournal, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.
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Who cites it
8 citing papers in PubMed.
- Exploring the Species Diversity of Edible Mushrooms in Yunnan, Southwestern China, by DNA Barcoding.Journal of fungi (Basel, Switzerland) · 2021Article
- Molecular characterization of most cultivatedHeliyon · 2021Article
- The saprotrophicIMA fungus · 2020Article
- Application of Molecular Methods in the Identification of Ingredients in Chinese Herbal Medicines.Molecules (Basel, Switzerland) · 2018Review
- Molecular identification of some wild Nigerian mushrooms using internal transcribed spacer: polymerase chain reaction.AMB Express · 2018Article
- Assessment of Genetic Diversity among Pleurotus spp. Isolates from Jordan.Journal of fungi (Basel, Switzerland) · 2018Article
- Escaping introns in COI through cDNA barcoding of mushrooms:Ecology and evolution · 2017Article
- Phylogenetic relationship of two popular edible Pleurotus in China, Bailinggu (P. eryngii var. tuoliensis) and Xingbaogu (P. eryngii), determined by ITS, RPB2 and EF1α sequences.Molecular biology reports · 2016Article
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5 authors.
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Abstract
Identification of edible mushrooms particularly Pleurotus genus has been restricted due to various obstacles. The present study attempted to use the combination of two variable regions of IGS1 and ITS for classifying the economically cultivated Pleurotus species. Integration of the two regions proved a high ability that not only could clearly distinguish the species but also served sufficient intraspecies variation. Phylogenetic tree (IGS1+ITS) showed seven distinct clades, each clade belonging to a separate species group. Moreover, the species differentiation was tested by AMOVA and the results were reconfirmed by presenting appropriate amounts of divergence (91.82% among and 8.18% within the species). In spite of achieving a proper classification of species by combination of IGS1 and ITS sequences, the phylogenetic tree showed the misclassification of the species of P. nebrodensis and P. eryngii var. ferulae with other strains of P. eryngii. However, the constructed median joining (MJ) network could not only differentiate between these species but also offer a profound perception of the species' evolutionary process. Eventually, due to the sufficient variation among and within species, distinct sequences, simple amplification, and location between ideal conserved ribosomal genes, the integration of IGS1 and ITS sequences is recommended as a desirable DNA barcode.
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