Evidence map›Paper›PMID 24587296›Full record

ArticlePloS one2014

Endogenous methanol regulates mammalian gene activity.

Tatiana V Komarova, Igor V Petrunia, Anastasia V Shindyapina, Denis N Silachev, Ekaterina V Sheshukova, Gleb I Kiryanov, Yuri L Dorokhov

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.7field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 20 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Tatiana V KomarovaA. N. Belozersky Institute of Physico-Chemical Biology, Moscow State University, Moscow, Russia ; N. I. Vavilov Institute of General Genetics, Russian Academy of Science, Moscow, Russia.
Igor V PetruniaN. I. Vavilov Institute of General Genetics, Russian Academy of Science, Moscow, Russia.
Anastasia V ShindyapinaN. I. Vavilov Institute of General Genetics, Russian Academy of Science, Moscow, Russia.
Denis N SilachevA. N. Belozersky Institute of Physico-Chemical Biology, Moscow State University, Moscow, Russia.
Ekaterina V SheshukovaN. I. Vavilov Institute of General Genetics, Russian Academy of Science, Moscow, Russia.
Gleb I KiryanovA. N. Belozersky Institute of Physico-Chemical Biology, Moscow State University, Moscow, Russia.
Yuri L DorokhovA. N. Belozersky Institute of Physico-Chemical Biology, Moscow State University, Moscow, Russia ; N. I. Vavilov Institute of General Genetics, Russian Academy of Science, Moscow, Russia.
Vavilov Institute of General Genetics · RULomonosov Moscow State University · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We recently showed that methanol emitted by wounded plants might function as a signaling molecule for plant-to-plant and plant-to-animal communications. In mammals, methanol is considered a poison because the enzyme alcohol dehydrogenase (ADH) converts methanol into toxic formaldehyde. However, the detection of methanol in the blood and exhaled air of healthy volunteers suggests that methanol may be a chemical with specific functions rather than a metabolic waste product. Using a genome-wide analysis of the mouse brain, we demonstrated that an increase in blood methanol concentration led to a change in the accumulation of mRNAs from genes primarily involved in detoxification processes and regulation of the alcohol/aldehyde dehydrogenases gene cluster. To test the role of ADH in the maintenance of low methanol concentration in the plasma, we used the specific ADH inhibitor 4-methylpyrazole (4-MP) and showed that intraperitoneal administration of 4-MP resulted in a significant increase in the plasma methanol, ethanol and formaldehyde concentrations. Removal of the intestine significantly decreased the rate of methanol addition to the plasma and suggested that the gut flora may be involved in the endogenous production of methanol. ADH in the liver was identified as the main enzyme for metabolizing methanol because an increase in the methanol and ethanol contents in the liver homogenate was observed after 4-MP administration into the portal vein. Liver mRNA quantification showed changes in the accumulation of mRNAs from genes involved in cell signalling and detoxification processes. We hypothesized that endogenous methanol acts as a regulator of homeostasis by controlling the mRNA synthesis.

Indexed as

Gene Expression RegulationAldehyde DehydrogenaseAnimalsBrainEthanolGastrointestinal TractGene Expression ProfilingGenome-Wide Association StudyLiverMaleMammalsMethanolMiceRatsReproducibility of ResultsRNA, MessengerAldehyde DehydrogenaseEthanolMethanolRNA, Messenger

Identifiers

PMID24587296
PMCPMC3937363
OpenAlexW1996485249

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.