Evidence map›Paper›PMID 24587088›Full record

ArticlePloS one2014

Regulatory specialization of xyloglucan (XG) and glucuronoarabinoxylan (GAX) in pericarp cell walls during fruit ripening in tomato (Solanum lycopersicum).

Ayami Takizawa, Hiromi Hyodo, Kanako Wada, Tadashi Ishii, Shinobu Satoh, Hiroaki Iwai

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
3.3field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 41 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Ayami TakizawaUniversity of Tsukuba, Faculty of Life and Environmental Sciences, Tsukuba, Ibaraki, Japan.
Hiromi HyodoUniversity of Tsukuba, Faculty of Life and Environmental Sciences, Tsukuba, Ibaraki, Japan.
Kanako WadaUniversity of Tsukuba, Faculty of Life and Environmental Sciences, Tsukuba, Ibaraki, Japan.
Tadashi IshiiUniversity of Tsukuba, Faculty of Life and Environmental Sciences, Tsukuba, Ibaraki, Japan.
Shinobu SatohUniversity of Tsukuba, Faculty of Life and Environmental Sciences, Tsukuba, Ibaraki, Japan.
Hiroaki IwaiUniversity of Tsukuba, Faculty of Life and Environmental Sciences, Tsukuba, Ibaraki, Japan.
University of Tsukuba · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Disassembly of cell wall polysaccharides by various cell wall hydrolases during fruit softening causes structural changes in hemicellulose and pectin that affect the physical properties and softening of tomato fruit. In a previous study, we showed that the changes in pectin during tomato fruit ripening were unique in each fruit tissue. In this study, to clarify the changes in hemicellulose in tissues during tomato fruit ripening, we focused on glucuronoarabinoxylan (GAX) and xyloglucan (XG). GAX was detected only in the skin and inner epidermis of the pericarp using LM11 antibodies, whereas a large increase in XG was detected in all fruit tissues using LM15 antibodies. The activity of hemicellulose degradation enzymes, such as β-xylosidase and α-arabinofuranosidase, decreased gradually during fruit ripening, although the tomato fruits continued to soften. In contrast, GAX and XG biosynthesis-related genes were expressed in all tomato fruit tissues even during ripening, indicating that XG was synthesized throughout the fruit and that GAX may be synthesized only in the vascular bundles and the inner epidermis. Our results suggest that changes in the cell wall architecture and tissue-specific distribution of XG and GAX might be required for the regulation of fruit softening and the maintenance of fruit shape.

Indexed as

AgricultureCell WallDNA PrimersFruitGlucansGlycoside HydrolasesImmunohistochemistryReverse Transcriptase Polymerase Chain ReactionSolanum lycopersicumTolonium ChlorideXylansXylosidasesalpha-N-arabinofuranosidaseDNA Primersexo-1,4-beta-D-xylosidaseGlucansglucuronoarabinoxylanGlycoside HydrolasesTolonium ChlorideXylansxyloglucanXylosidases

Identifiers

PMID24587088
PMCPMC3935947
OpenAlexW1986059208

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.