Evidence map›Paper›PMID 24587009›Full record

ArticlePloS one2014

Biomarkers of histone deacetylase inhibitor activity in a phase 1 combined-modality study with radiotherapy.

Anne Hansen Ree, Marie Grøn Saelen, Erta Kalanxhi, Ingrid H G Østensen, Kristina Schee, Kathrine Røe, Torveig Weum Abrahamsen, Svein Dueland, Kjersti Flatmark

Abstract readClinical Trial, Phase I
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Anne Hansen ReeDepartment of Oncology, Akershus University Hospital, Lørenskog, Norway ; Institute of Clinical Medicine, University of Oslo, Oslo, Norway.
Marie Grøn SaelenDepartment of Tumor Biology, Oslo University Hospital - Norwegian Radium Hospital, Oslo, Norway ; Institute of Clinical Medicine, University of Oslo, Oslo, Norway.
Erta KalanxhiDepartment of Oncology, Akershus University Hospital, Lørenskog, Norway.
Ingrid H G ØstensenDepartment of Genes and Environment, Norwegian Institute of Public Health, Oslo, Norway.
Kristina ScheeDepartment of Tumor Biology, Oslo University Hospital - Norwegian Radium Hospital, Oslo, Norway.
Kathrine RøeDepartment of Oncology, Akershus University Hospital, Lørenskog, Norway.
Torveig Weum AbrahamsenDepartment of Tumor Biology, Oslo University Hospital - Norwegian Radium Hospital, Oslo, Norway.
Svein DuelandDepartment of Oncology, Oslo University Hospital - Norwegian Radium Hospital, Oslo, Norway.
Kjersti FlatmarkDepartment of Tumor Biology, Oslo University Hospital - Norwegian Radium Hospital, Oslo, Norway ; Department of Gastroenterological Surgery, Oslo University Hospital - Norwegian Radium Hospital, Oslo, Norway.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundFollowing the demonstration that histone deacetylase inhibitors enhanced experimental radiation-induced clonogenic suppression, the Pelvic Radiation and Vorinostat (PRAVO) phase 1 study, combining fractionated radiotherapy with daily vorinostat for pelvic carcinoma, was designed to evaluate both clinical and novel biomarker endpoints, the latter relating to pharmacodynamic indicators of vorinostat action in clinical radiotherapy. PATIENTS AND

methodsPotential biomarkers of vorinostat radiosensitizing action, not simultaneously manifesting molecular perturbations elicited by the radiation itself, were explored by gene expression array analysis of study patients' peripheral blood mononuclear cells (PBMC), sampled at baseline (T0) and on-treatment two and 24 hours (T2 and T24) after the patients had received vorinostat.

resultsThis strategy revealed 1,600 array probes that were common for the comparisons T2 versus T0 and T24 versus T2 across all of the patients, and furthermore, that no significantly differential expression was observed between the T0 and T24 groups. Functional annotation analysis of the array data showed that a significant number of identified genes were implicated in gene regulation, the cell cycle, and chromatin biology. Gene expression was validated both in patients' PBMC and in vorinostat-treated human carcinoma xenograft models, and transient repression of MYC was consistently observed.

conclusionWithin the design of the PRAVO study, all of the identified genes showed rapid and transient induction or repression and therefore, in principle, fulfilled the requirement of being pharmacodynamic biomarkers of vorinostat action in fractionated radiotherapy, possibly underscoring the role of MYC in this therapeutic setting.

Indexed as

Disease Models, AnimalAgedAged, 80 and overAnimalsBiomarkersCombined Modality TherapyFemaleGene Expression ProfilingHistone Deacetylase InhibitorsHumansHydroxamic AcidsLeukocytes, MononuclearMaleMiceMice, Inbred BALB CMicroarray AnalysisBiomarkersHistone Deacetylase InhibitorsHydroxamic AcidsRadiation-Sensitizing AgentsVorinostat

Identifiers

PMID24587009
PMCPMC3934935

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.