Evidence map›Paper›PMID 24586754›Full record

ArticlePloS one2014

JAK2-centered interactome hotspot identified by an integrative network algorithm in acute Stanford type A aortic dissection.

Sun Pan, Duojiao Wu, Andrew E Teschendorff, Tao Hong, Linyan Wang, Mengjia Qian, Chunsheng Wang, Xiangdong Wang

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
1.0field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 36 citations in OpenAlex.

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  14. IdentifyingFrontiers in cardiovascular medicine · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 2 countries.

Sun PanDepartment of Cardiac Surgery, Zhongshan Hospital, Fudan University, Shanghai, China.
Duojiao WuBiomedical Research Center, Zhongshan Hospital, Fudan University, Shanghai, China.
Andrew E TeschendorffUCL Cancer Institute, University College London, London, United Kingdom ; CAS-MPG Partner Institute for Computational Biology, Shanghai, China.
Tao HongDepartment of Cardiac Surgery, Zhongshan Hospital, Fudan University, Shanghai, China.
Linyan WangBiomedical Research Center, Zhongshan Hospital, Fudan University, Shanghai, China.
Mengjia QianBiomedical Research Center, Zhongshan Hospital, Fudan University, Shanghai, China.
Chunsheng WangDepartment of Cardiac Surgery, Zhongshan Hospital, Fudan University, Shanghai, China.
Xiangdong WangBiomedical Research Center, Zhongshan Hospital, Fudan University, Shanghai, China.
The First Affiliated Hospital, Sun Yat-sen University · CNZhongshan Hospital · CNCRUK Lung Cancer Centre of Excellence · GBFudan University · CNSun Yat-sen University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The precise mechanisms underlying dissections, especially those without connective tissue diseases or congenital vascular diseases, are incompletely understood. This study attempted to identify both the expression profile of the dissected ascending aorta and the interactome hotspots associated with the disease, using microarray technology and gene regulatory network analysis. There were 2,737 genes differentially expressed between patients with acute Stanford type A aortic dissection and controls. Eight interactome hotspots significantly associated with aortic dissection were identified by an integrative network algorithm. In particular, we identified a JAK2-centered expression module, which was validated in an independent gene expression microarray data set, and which was characterized by over-expressed cytokines and receptors in acute aortic dissection cases, indicating that JAK2 may play a key role in the inflammatory process, which potentially contributes to the occurrence of acute aortic dissection. Overall, the analytical strategy used in this study offered the possibility to identify functional relevant network modules and subsequently facilitated the biological interpretation in the complicated disease.

Indexed as

AdultAlgorithmsAortaAortic Aneurysm, ThoracicAortic DissectionFemaleGene Regulatory NetworksHumansJanus Kinase 2MaleTranscriptomeJAK2 protein, humanJanus Kinase 2

Identifiers

PMID24586754
PMCPMC3933461
OpenAlexW2057462930

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.