Evidence map›Paper›PMID 24586484›Full record

ArticlePloS one2014

Neuronal-specific deficiency of the splicing factor Tra2b causes apoptosis in neurogenic areas of the developing mouse brain.

Markus Storbeck, Kristina Hupperich, John Antonydas Gaspar, Kesavan Meganathan, Lilian Martínez Carrera, Radu Wirth, Agapios Sachinidis, Brunhilde Wirth

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 34 citations in OpenAlex.

  1. Article
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  7. Review
  8. Ultra-Conserved Poison Exons Enable Rapid and Safe Splicing Factor Gene Expression Switches: A Hypothesis.BioEssays : news and reviews in molecular, cellular and developmental biology · 2025
    Review
  9. Review
  10. SRC Kinase Isoforms Regulate mRNA Splicing during Neural Development.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2025
    Article
  11. Article
  12. SR proteins in cancer: function, regulation, and small inhibitor.Cellular & molecular biology letters · 2024
    Review
  13. Review
  14. Article
  15. Article
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  19. PLS3 Overexpression Delays Ataxia inFrontiers in neuroscience · 2019
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Markus StorbeckInstitute of Human Genetics, University of Cologne, Cologne, Germany ; Institute of Genetics, University of Cologne, Cologne, Germany ; Center for Molecular Medicine, University of Cologne, Cologne, Germany.
Kristina HupperichInstitute of Human Genetics, University of Cologne, Cologne, Germany ; Institute of Genetics, University of Cologne, Cologne, Germany ; Center for Molecular Medicine, University of Cologne, Cologne, Germany.
John Antonydas GasparInsitute of Neurophysiology, University of Cologne, Cologne, Germany.
Kesavan MeganathanInsitute of Neurophysiology, University of Cologne, Cologne, Germany.
Lilian Martínez CarreraInstitute of Human Genetics, University of Cologne, Cologne, Germany ; Institute of Genetics, University of Cologne, Cologne, Germany ; Center for Molecular Medicine, University of Cologne, Cologne, Germany.
Radu WirthInstitute of Human Genetics, University of Cologne, Cologne, Germany.
Agapios SachinidisInsitute of Neurophysiology, University of Cologne, Cologne, Germany.
Brunhilde WirthInstitute of Human Genetics, University of Cologne, Cologne, Germany ; Institute of Genetics, University of Cologne, Cologne, Germany ; Center for Molecular Medicine, University of Cologne, Cologne, Germany.
University of Cologne · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Alternative splicing (AS) increases the informational content of the genome and is more prevalent in the brain than in any other tissue. The splicing factor Tra2b (Sfrs10) can modulate splicing inclusion of exons by specifically detecting GAA-rich binding motifs and its absence causes early embryonic lethality in mice. TRA2B has been shown to be involved in splicing processes of Nasp (nuclear autoantigenic sperm protein), MAPT (microtubule associated protein tau) and SMN (survival motor neuron), and is therefore implicated in spermatogenesis and neurological diseases like Alzheimer's disease, dementia, Parkinson's disease and spinal muscular atrophy. Here we generated a neuronal-specific Tra2b knock-out mouse that lacks Tra2b expression in neuronal and glial precursor cells by using the Nestin-Cre. Neuronal-specific Tra2b knock-out mice die immediately after birth and show severe abnormalities in cortical development, which are caused by massive apoptotic events in the ventricular layers of the cortex, demonstrating a pivotal role of Tra2b for the developing central nervous system. Using whole brain RNA on exon arrays we identified differentially expressed alternative exons of Tubulinδ1 and Shugoshin-like2 as in vivo targets of Tra2b. Most interestingly, we found increased expression of the cyclin dependent kinase inhibitor 1a (p21) which we could functionally link to neuronal precursor cells in the affected brain regions. We provide further evidence that the absence of Tra2b causes p21 upregulation and ultimately cell death in NSC34 neuronal-like cells. These findings demonstrate that Tra2b regulates splicing events essential for maintaining neuronal viability during development. Apoptotic events triggered via p21 might not be restricted to the developing brain but could possibly be generalized to the whole organism and explain early embryonic lethality in Tra2b-depleted mice.

Indexed as

AnimalsApoptosisBrainCells, CulturedEmbryo LossEmbryo, MammalianFemaleMiceMice, Inbred C57BLMice, KnockoutNeural Stem CellsNeurogenesisNeuronsNuclear ProteinsPregnancyRNA-Binding ProteinsNuclear ProteinsRNA-Binding ProteinsSerine-Arginine Splicing FactorsTra2b protein, mouse

Identifiers

PMID24586484
PMCPMC3929626
OpenAlexW2053858960

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.