Evidence map›Paper›PMID 24586425›Full record

ArticlePloS one2014

The G⁵¹⁶T CYP2B6 germline polymorphism affects the risk of acute myeloid leukemia and is associated with specific chromosomal abnormalities.

Aggeliki Daraki, Sophia Zachaki, Theodora Koromila, Paraskevi Diamantopoulou, Gabriel E Pantelias, Constantina Sambani, Vasiliki Aleporou, Panagoula Kollia, Kalliopi N Manola

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.8field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 18 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Aggeliki DarakiLaboratory of Health Physics, Radiobiology & Cytogenetics, National Centre for Scientific Research (NCSR) "Demokritos", Athens, Greece ; Department of Genetics & Biotechnology, Faculty of Biology, National and Kapodistrian University of Athens, Athens, Greece.
Sophia ZachakiLaboratory of Health Physics, Radiobiology & Cytogenetics, National Centre for Scientific Research (NCSR) "Demokritos", Athens, Greece.
Theodora KoromilaDepartment of Genetics & Biotechnology, Faculty of Biology, National and Kapodistrian University of Athens, Athens, Greece.
Paraskevi DiamantopoulouLaboratory of Health Physics, Radiobiology & Cytogenetics, National Centre for Scientific Research (NCSR) "Demokritos", Athens, Greece.
Gabriel E PanteliasLaboratory of Health Physics, Radiobiology & Cytogenetics, National Centre for Scientific Research (NCSR) "Demokritos", Athens, Greece.
Constantina SambaniLaboratory of Health Physics, Radiobiology & Cytogenetics, National Centre for Scientific Research (NCSR) "Demokritos", Athens, Greece.
Vasiliki AleporouDepartment of Genetics & Biotechnology, Faculty of Biology, National and Kapodistrian University of Athens, Athens, Greece.
Panagoula KolliaDepartment of Genetics & Biotechnology, Faculty of Biology, National and Kapodistrian University of Athens, Athens, Greece.
Kalliopi N ManolaLaboratory of Health Physics, Radiobiology & Cytogenetics, National Centre for Scientific Research (NCSR) "Demokritos", Athens, Greece.
National Centre of Scientific Research "Demokritos" · GRNational and Kapodistrian University of Athens · GR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The etiology of acute myeloid leukemia (AML) underlies the influence of genetic variants in candidate genes. The CYP2B6 enzyme detoxifies many genotoxic xenobiotics, protecting cells from oxidative damage. The CYP2B6 gene is subjected to a single-nucleotide polymorphism (G⁵¹⁶T) with heterozygotes (GT) and homozygotes (TT) presenting decreased enzymatic activity. This case-control study aimed to investigate the association of CYP2B6 G⁵¹⁶T polymorphism with the susceptibility of AML and its cytogenetic and clinical characteristics. Genotyping was performed on 619 AML patients and 430 healthy individuals using RCR-RFLP and a novel LightSNip assay. The major finding was a statistically higher frequency of the variant genotypes (GT and TT) in patients compared to the controls (GT:38.8% vs 29.8% and TT:9.3% vs 5.3% respectively) (p<0.001). More specifically, a significantly higher frequency of GT+TT genotypes in de novo AML patients (46.6%) and an immensely high frequency of TT in secondary AML (s-AML) (20.5%) were observed. The statistical analysis showed that the variant T allele was approximately 1.5-fold and 2.4-fold higher in de novo and s-AML respectively than controls. Concerning FAB subtypes, the T allele presented an almost 2-fold increased in AML-M2. Interestingly, a higher incidence of the TT genotype was observed in patients with abnormal karyotypes. In particular, positive correlations of the mutant allele were found in patients carrying specific chromosomal aberrations [-7/del(7q), -5/del(5q), +8, +21 or t(8;21)], complex or monosomal karyotypes. Finally, a strikingly higher frequency of TT genotype was also observed in patients stratified to the poor risk group. In conclusion, our results provide evidence for the involvement of the CYP2B6 polymorphism in AML susceptibility and suggest a possible role of the CYP2B6 genetic background on the development of specific chromosomal aberrations.

Indexed as

AllelesCase-Control StudiesChromosome AberrationsChromosome DisordersCytochrome P-450 CYP2B6Genetic Predisposition to DiseaseGenotypeGerm-Line MutationHumansKaryotypeKaryotypingLeukemia, Myeloid, AcutePolymorphism, GeneticRiskCYP2B6 protein, humanCytochrome P-450 CYP2B6

Identifiers

PMID24586425
PMCPMC3933334
OpenAlexW2141662139

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.