Evidence map›Paper›PMID 24586318›Full record

ArticlePloS one2014

A DTC niche plexus surrounds the germline stem cell pool in Caenorhabditis elegans.

Dana T Byrd, Karla Knobel, Katharyn Affeldt, Sarah L Crittenden, Judith Kimble

Abstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 55 papers.

0numbers the graph read from it
0cells of the map it votes in
55citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

55 citing papers in PubMed.

  1. Article
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  5. Article
  6. Non-autonomy of age-related morphological changes in thebioRxiv : the preprint server for biology · 2025
    Article
  7. Basal cytoplasmic calcium levels regulatebioRxiv : the preprint server for biology · 2025
    Article
  8. Article
  9. Article
  10. Article
  11. Notch controls APC/CScience advances · 2025
    Article
  12. Journal of biosciences · 2025
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Oogenesis in Caenorhabditis elegans.Sexual development : genetics, molecular biology, evolution, endocrinology, embryology, and pathology of sex determination and differentiation · 2023
    Review
  20. Analysis of the C. elegans Germline Stem Cell Pool.Methods in molecular biology (Clifton, N.J.) · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Dana T ByrdHoward Hughes Medical Institute, University of Wisconsin-Madison, Madison, Wisconsin, United States of America ; Department of Biochemistry, University of Wisconsin-Madison, Madison, Wisconsin, United States of America.
Karla KnobelDepartment of Biochemistry, University of Wisconsin-Madison, Madison, Wisconsin, United States of America.
Katharyn AffeldtDepartment of Biochemistry, University of Wisconsin-Madison, Madison, Wisconsin, United States of America.
Sarah L CrittendenHoward Hughes Medical Institute, University of Wisconsin-Madison, Madison, Wisconsin, United States of America.
Judith KimbleHoward Hughes Medical Institute, University of Wisconsin-Madison, Madison, Wisconsin, United States of America ; Department of Biochemistry, University of Wisconsin-Madison, Madison, Wisconsin, United States of America ; Laboratory of Molecular Biology, University of Wisconsin-Madison, Madison, Wisconsin, United States of America ; Department of Medical Genetics, University of Wisconsin-Madison, Madison, Wisconsin, United States of America.

Funding

Regulation of germline proliferation and differentiationR01GM069454 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI KIMBLE, JUDITH · 2004 to 2012
$1.8M
REGULATION OF GERMLINE STEM CELLS IN C. ELEGANSF32GM072126 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI BYRD, DANA · 2004 to 2007
$142k
Howard Hughes Medical InstituteNIGMS NIH HHS F32 GM072126NIGMS NIH HHS R01 GM069454
6 · The paper itself

Abstract

The mesenchymal distal tip cell (DTC) provides the niche for Caenorhabditis elegans germline stem cells (GSCs). The DTC has a complex cellular architecture: its cell body caps the distal gonadal end and contacts germ cells extensively, but it also includes multiple cellular processes that extend along the germline tube and intercalate between germ cells. Here we use the lag-2 DTC promoter to drive expression of myristoylated GFP, which highlights DTC membranes and permits a more detailed view of DTC architecture. We find that short processes intercalating between germ cells contact more germ cells than seen previously. We define this region of extensive niche contact with germ cells as the DTC plexus. The extent of the DTC plexus corresponds well with the previously determined extent of the GSC pool. Moreover, expression of a differentiation marker increases as germ cells move out of the plexus. Maintenance of this DTC plexus depends on the presence of undifferentiated germ cells, suggesting that germ cell state can influence niche architecture. The roles of this DTC architecture remain an open question. One idea is that the DTC plexus delivers Notch signaling to the cluster of germ cells comprising the GSC pool; another idea is that the plexus anchors GSCs at the distal end.

Indexed as

Stem Cell NicheAnimalsCaenorhabditis elegansCaenorhabditis elegans ProteinsCell MembraneGene Expression RegulationGerm CellsLuminescent ProteinsMesenchymal Stem CellsMitosisCaenorhabditis elegans ProteinsGLD-1 protein, C elegansLuminescent Proteins

Identifiers

PMID24586318
PMCPMC3929564

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.