Evidence map›Paper›PMID 24586277›Full record

ArticlePloS one2014

Increased constituent ratios of Klebsiella sp., Acinetobacter sp., and Streptococcus sp. and a decrease in microflora diversity may be indicators of ventilator-associated pneumonia: a prospective study in the respiratory tracts of neonates.

Wei Lu, Jialin Yu, Qing Ai, Dong Liu, Chao Song, Luquan Li

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 37 citations in OpenAlex.

  1. Article
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  4. Review
  5. Article
  6. Article
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  8. Article
  9. Microbiota in ICU, not only a gut problem.Intensive care medicine · 2019
    Article
  10. Observational
  11. Microbial diversity within the airway microbiome in chronic pediatric lung diseases.Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases · 2018
    Review
  12. Article
  13. Article
  14. Review
  15. Review
  16. Article
  17. The microbiome and critical illness.The Lancet. Respiratory medicine · 2016
    Review
  18. Article
  19. Article
4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Wei LuDepartment of Neonatology, Children's Hospital of Chongqing Medical University, Chongqing, China ; Pediatrics Research Institution, Children's Hospital of Chongqing Medical University, Chongqing, China ; Ministry of Education Key Laboratory of Child Development and Disorder, Children's Hospital of Chongqing Medical University, Chongqing, China.
Jialin YuDepartment of Neonatology, Children's Hospital of Chongqing Medical University, Chongqing, China ; Pediatrics Research Institution, Children's Hospital of Chongqing Medical University, Chongqing, China ; Ministry of Education Key Laboratory of Child Development and Disorder, Children's Hospital of Chongqing Medical University, Chongqing, China.
Qing AiPediatrics Research Institution, Children's Hospital of Chongqing Medical University, Chongqing, China ; Ministry of Education Key Laboratory of Child Development and Disorder, Children's Hospital of Chongqing Medical University, Chongqing, China.
Dong LiuDepartment of Neonatology, Children's Hospital of Chongqing Medical University, Chongqing, China ; Pediatrics Research Institution, Children's Hospital of Chongqing Medical University, Chongqing, China ; Ministry of Education Key Laboratory of Child Development and Disorder, Children's Hospital of Chongqing Medical University, Chongqing, China.
Chao SongDepartment of Neonatology, Children's Hospital of Chongqing Medical University, Chongqing, China ; Pediatrics Research Institution, Children's Hospital of Chongqing Medical University, Chongqing, China ; Ministry of Education Key Laboratory of Child Development and Disorder, Children's Hospital of Chongqing Medical University, Chongqing, China.
Luquan LiDepartment of Neonatology, Children's Hospital of Chongqing Medical University, Chongqing, China ; Pediatrics Research Institution, Children's Hospital of Chongqing Medical University, Chongqing, China ; Ministry of Education Key Laboratory of Child Development and Disorder, Children's Hospital of Chongqing Medical University, Chongqing, China.
Chongqing Medical University · CNChildren's Hospital of Chongqing Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ventilator-associated pneumonia (VAP) is a common complication and cause of death in neonates on mechanical ventilation. However, it is difficult to define the causes of VAP. To understand the causes of VAP, we undertook a prospective study based on the diversity of the microflora in VAP. The experimental group consisted of newborns who suffered from respiratory distress syndrome (RDS) and VAP, while the control group suffered from RDS without VAP. Sputa were collected within 1, 3, and 5 days of ventilation and were divided into six groups. DNA was extracted from the samples, and the 16S rDNA was PCR amplified, separated using denaturing gradient gel electrophoresis (DGGE), cloned and sequenced. The resulting sequences were compared using BLAST. The DGGE pictures were measured, and the richness, Shannon-Wiener index, and cluster maps were analyzed. No differences were found regarding the constituent ratio of any genus between the Non-VAP and VAP group within 1 day after intubation. After 1 to 3 days, the constituent ratios of Klebsiella sp., Acinetobacter sp., and Streptococcus sp. in the VAP group were higher than those in the Non-VAP group, and the ratios of Serratia sp. and Achromobacter sp. were lower. After 3 to 5 days, the ratios of Klebsiella sp., Acinetobacter sp., Serratia sp., and Achromobacter sp. were lower than those in the Non-VAP group. The richness and Shannon-Wiener index of the Non-VAP group were higher than those of the VAP group from 1 to 3 days after intubation, while no differences were found within 1 day and from 3 to 5 days. We conclude that during the first three days of intubation, the microflora diversity in the lower respiratory tract was reduced due to VAP, and the greater constituent ratios of Klebsiella sp., Acinetobacter sp., and Streptococcus sp. in the sputum may be indicators of VAP.

Indexed as

BiodiversityMicrobiotaAcinetobacterAnalysis of VarianceBase SequenceCloning, MolecularDenaturing Gradient Gel ElectrophoresisDNA PrimersHumansInfant, NewbornKlebsiellaMolecular Sequence DataPneumonia, Ventilator-AssociatedProspective StudiesRNA, Ribosomal, 16SSequence Analysis, DNADNA PrimersRNA, Ribosomal, 16S

Identifiers

PMID24586277
PMCPMC3930531
OpenAlexW2035548107

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.