Evidence map›Paper›PMID 24586210›Full record

ArticlePLoS genetics2014

Convergence of Light and ABA signaling on the ABI5 promoter.

Dongqing Xu, Jigang Li, Sreeramaiah N Gangappa, Chamari Hettiarachchi, Fang Lin, Mats X Andersson, Yan Jiang, Xing Wang Deng, Magnus Holm

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 104 papers.

0numbers the graph read from it
0cells of the map it votes in
104citing papers in PubMed
18.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

104 citing papers in PubMed, 238 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Identification and Characterization of theInternational journal of molecular sciences · 2023
    Article
  19. Review
  20. CRISPR/Cas9-MediatedInternational journal of molecular sciences · 2023
    Article

44 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 3 countries.

Dongqing XuDepartment of Biological and Environmental Sciences, Gothenburg University, Gothenburg, Sweden ; Peking-Yale Joint Center for Plant Molecular Genetics and Agro-Biotechnology, State Key Laboratory of Protein and Plant Gene Research, School of Life Sciences, Peking University, Beijing, China.
Jigang LiPeking-Yale Joint Center for Plant Molecular Genetics and Agro-Biotechnology, State Key Laboratory of Protein and Plant Gene Research, School of Life Sciences, Peking University, Beijing, China ; State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University, Beijing, China ; Department of Molecular, Cellular, and Developmental Biology, Yale University, New Haven, Connecticut, United States of America.
Sreeramaiah N GangappaDepartment of Biological and Environmental Sciences, Gothenburg University, Gothenburg, Sweden.
Chamari HettiarachchiDepartment of Biological and Environmental Sciences, Gothenburg University, Gothenburg, Sweden.
Fang LinPeking-Yale Joint Center for Plant Molecular Genetics and Agro-Biotechnology, State Key Laboratory of Protein and Plant Gene Research, School of Life Sciences, Peking University, Beijing, China.
Mats X AnderssonDepartment of Biological and Environmental Sciences, Gothenburg University, Gothenburg, Sweden.
Yan JiangDepartment of Biological and Environmental Sciences, Gothenburg University, Gothenburg, Sweden.
Xing Wang DengPeking-Yale Joint Center for Plant Molecular Genetics and Agro-Biotechnology, State Key Laboratory of Protein and Plant Gene Research, School of Life Sciences, Peking University, Beijing, China ; Department of Molecular, Cellular, and Developmental Biology, Yale University, New Haven, Connecticut, United States of America.
Magnus HolmDepartment of Biological and Environmental Sciences, Gothenburg University, Gothenburg, Sweden.
University of Gothenburg · SEPeking University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Light is one of the most important environmental cues regulating multiple aspects of plant growth and development, and abscisic acid (ABA) is a plant hormone that plays important roles during many phases of the plant life cycle and in plants' responses to various environmental stresses. How plants integrate the external light signal with endogenous ABA pathway for better adaptation and survival remains poorly understood. Here, we show that BBX21 (also known as SALT TOLERANCE HOMOLOG 2), a B-box (BBX) protein previously shown to positively regulate seedling photomorphogenesis, is also involved in ABA signaling. Our genetic data show that BBX21 may act upstream of several ABA INSENSITIVE (ABI) genes and ELONGATED HYPOCOTYL 5 (HY5) in ABA control of seed germination. Previous studies showed that HY5 acts as a direct activator of ABI5 expression, and that BBX21 interacts with HY5. We further demonstrate that BBX21 negatively regulates ABI5 expression by interfering with HY5 binding to the ABI5 promoter. In addition, ABI5 was shown to directly activate its own expression, whereas BBX21 negatively regulates this activity by directly interacting with ABI5. Together, our study indicates that BBX21 coordinates with HY5 and ABI5 on the ABI5 promoter and that these transcriptional regulators work in concert to integrate light and ABA signaling in Arabidopsis thaliana.

Indexed as

LightAbscisic AcidArabidopsisArabidopsis ProteinsBasic-Leucine Zipper Transcription FactorsGene Expression Regulation, PlantGerminationMutationNuclear ProteinsPromoter Regions, GeneticSeedsSignal TransductionTranscription FactorsABI5 protein, ArabidopsisAbscisic AcidArabidopsis ProteinsBasic-Leucine Zipper Transcription FactorsBBX21 protein, ArabidopsisHY5 protein, ArabidopsisNuclear ProteinsTranscription Factors

Identifiers

PMID24586210
PMCPMC3937224
OpenAlexW2090810102

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.