Evidence map›Paper›PMID 24586193›Full record

ArticlePLoS genetics2014

A variant in the neuropeptide receptor npr-1 is a major determinant of Caenorhabditis elegans growth and physiology.

Erik C Andersen, Joshua S Bloom, Justin P Gerke, Leonid Kruglyak

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 119 papers.

0numbers the graph read from it
0cells of the map it votes in
119citing papers in PubMed
5.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

119 citing papers in PubMed, 201 citations in OpenAlex.

  1. DivergenteLife · 2026
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  7. A gap-free, telomere-to-telomere genome assembly for thebioRxiv : the preprint server for biology · 2026
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  10. Global genomic diversity of the selfing nematodebioRxiv : the preprint server for biology · 2026
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  13. Natural variation suggests candidate genes underlyingbioRxiv : the preprint server for biology · 2025
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  15. Fecundities of HawaiianmicroPublication biology · 2025
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  17. Faster genetic mapping of complex traits inmicroPublication biology · 2025
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59 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Erik C AndersenLewis-Sigler Institute for Integrative Genomics, Princeton University, Princeton, New Jersey, United States of America.
Joshua S BloomLewis-Sigler Institute for Integrative Genomics, Princeton University, Princeton, New Jersey, United States of America ; Department of Molecular Biology, Princeton University, Princeton, New Jersey, United States of America.
Justin P GerkeLewis-Sigler Institute for Integrative Genomics, Princeton University, Princeton, New Jersey, United States of America.
Leonid KruglyakDepartments of Human Genetics and Biological Chemistry, David Geffen School of Medicine, University of California Los Angeles, Los Angeles, California, United States of America ; Howard Hughes Medical Institute, Chevy Chase, Maryland, United States of America.
Princeton University · USHoward Hughes Medical Institute · US

Funding

Tumor Environment and Metastasis (TEAM) Research ProgramP30CA060553 · NCI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI Daniela E Matei · 1993 to 2026
$153.9M
Spatial Patterning During DevelopmentP50GM071508 · NIGMS · PRINCETON UNIVERSITY · PI POWELL, SUSAN M · 2004 to 2013
$30.6M
PREDOCTORAL TRAINING PROGRAM IN GENETICST32GM007388 · NIGMS · PRINCETON UNIVERSITY · PI CRISTEA, ILEANA M. · 1985 to 2022
$27.4M
ONCOLOGY: MOLECULAR BASIS OF CANCERT32CA009528 · NCI · PRINCETON UNIVERSITY · PI BROACH, JAMES R. · 1985 to 2010
$5.9M
Quantitative Methods for Linkage and Associated StudiesR37MH059520 · NIMH · PRINCETON UNIVERSITY · PI KRUGLYAK, LEONID · 2002 to 2011
$3.6M
Genetic dissection of transcriptional and organismal phenotypes in C. elegansR01HG004321 · NHGRI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI KRUGLYAK, LEONID · 2007 to 2014
$1.9M
Quantitative genetic analyses of conserved C. elegans signaling pathwaysF32GM089007 · NIGMS · PRINCETON UNIVERSITY · PI ANDERSEN, ERIK CHRISTIAN · 2009 to 2010
$87k
NCI NIH HHS T32 CA009528NCI NIH HHS T32-CA009528NHGRI NIH HHS R01 HG004321NHGRI NIH HHS R01-HG004321NIGMS NIH HHS F32 GM089007NIGMS NIH HHS F32-GM089007NIGMS NIH HHS P50 GM071508NIGMS NIH HHS P50-GM071508NIMH NIH HHS R37 MH059520NIMH NIH HHS R37-MH59520
6 · The paper itself

Abstract

The mechanistic basis for how genetic variants cause differences in phenotypic traits is often elusive. We identified a quantitative trait locus in Caenorhabditis elegans that affects three seemingly unrelated phenotypic traits: lifetime fecundity, adult body size, and susceptibility to the human pathogen Staphyloccus aureus. We found a QTL for all three traits arises from variation in the neuropeptide receptor gene npr-1. Moreover, we found that variation in npr-1 is also responsible for differences in 247 gene expression traits. Variation in npr-1 is known to determine whether animals disperse throughout a bacterial lawn or aggregate at the edges of the lawn. We found that the allele that leads to aggregation is associated with reduced growth and reproductive output. The altered gene expression pattern caused by this allele suggests that the aggregation behavior might cause a weak starvation state, which is known to reduce growth rate and fecundity. Importantly, we show that variation in npr-1 causes each of these phenotypic differences through behavioral avoidance of ambient oxygen concentrations. These results suggest that variation in npr-1 has broad pleiotropic effects mediated by altered exposure to bacterial food.

Indexed as

AllelesAnimalsBody SizeCaenorhabditis elegansCaenorhabditis elegans ProteinsFemaleFertilityGenetic VariationHumansMutationNeuropeptidesQuantitative Trait LociReceptors, Neuropeptide YStaphylococcus aureusCaenorhabditis elegans ProteinsNeuropeptidesNPR-1 protein, C elegansReceptors, Neuropeptide Y

Identifiers

PMID24586193
PMCPMC3937155
OpenAlexW1998224653

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.