Evidence map›Paper›PMID 24586180›Full record

ArticlePLoS genetics2014

Loss of Trabid, a new negative regulator of the drosophila immune-deficiency pathway at the level of TAK1, reduces life span.

Merennege Dilan Anush Fernando, Ilias Kounatidis, Petros Ligoxygakis

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 63 citations in OpenAlex.

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  10. The Intestinal Immune Defense System in Insects.International journal of molecular sciences · 2022
    Review
  11. International journal of molecular sciences · 2022
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  16. Aspirin Positively Contributes toAging and disease · 2021
    Article
  17. Article
  18. Disparate regulation of IMD signaling drives sex differences in infection pathology inProceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Merennege Dilan Anush FernandoGenes and Development Laboratory, Department of Biochemistry, University of Oxford, Oxford, United Kingdom.
Ilias KounatidisGenes and Development Laboratory, Department of Biochemistry, University of Oxford, Oxford, United Kingdom.
Petros LigoxygakisGenes and Development Laboratory, Department of Biochemistry, University of Oxford, Oxford, United Kingdom.
University of Oxford · GB

Funding

Medical Research Council G0300170
6 · The paper itself

Abstract

A relatively unexplored nexus in Drosophila Immune deficiency (IMD) pathway is TGF-beta Activating Kinase 1 (TAK1), which triggers both immunity and apoptosis. In a cell culture screen, we identified that Lysine at position 142 was a K63-linked Ubiquitin acceptor site for TAK1, required for signalling. Moreover, Lysine at position 156 functioned as a K48-linked Ubiquitin acceptor site, also necessary for TAK1 activity. The deubiquitinase Trabid interacted with TAK1, reducing immune signalling output and K63-linked ubiquitination. The three tandem Npl4 Zinc Fingers and the catalytic Cysteine at position 518 were required for Trabid activity. Flies deficient for Trabid had a reduced life span due to chronic activation of IMD both systemically as well as in their gut where homeostasis was disrupted. The TAK1-associated Binding Protein 2 (TAB2) was linked with the TAK1-Trabid interaction through its Zinc finger domain that pacified the TAK1 signal. These results indicate an elaborate and multi-tiered mechanism for regulating TAK1 activity and modulating its immune signal.

Indexed as

AnimalsApoptosisDrosophilaDrosophila ProteinsEndopeptidasesLysineMAP Kinase Kinase KinasesNF-kappa BSignal TransductionUbiquitinUbiquitinationUbiquitin-Specific ProteasesDrosophila ProteinsEndopeptidasesimd protein, DrosophilaLysineMAP Kinase Kinase KinasesNF-kappa BTAK1 protein, Drosophilatrbd protein, DrosophilaUbiquitinUbiquitin-Specific Proteases

Identifiers

PMID24586180
PMCPMC3930493
OpenAlexW2069399195

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.