Evidence map›Paper›PMID 24586053›Full record

ArticleProtein engineering, design & selection : PEDS2014

In vitro Fab display: a cell-free system for IgG discovery.

Ryan L Stafford, Marissa L Matsumoto, Gang Yin, Qi Cai, Juan Jose Fung, Heather Stephenson, Avinash Gill, Monica You, Shwu-Hwa Lin, Willie D Wang and 9 more

Open access · hybridAbstract read
In one paragraph

Article in Protein engineering, design & selection : PEDS, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
4.8field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 42 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. Cell-Free Protein Synthesis: A Promising Option for Future Drug Development.BioDrugs : clinical immunotherapeutics, biopharmaceuticals and gene therapy · 2020
    Review
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Review
  16. Cell-Free Synthetic Biology: Engineering Beyond the Cell.Cold Spring Harbor perspectives in biology · 2016
    Review
  17. Article
  18. Review
  19. Article
  20. Advances in the directed evolution of proteins.Current opinion in chemical biology · 2014
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 2 institutions in 1 country.

Ryan L StaffordSutro Biopharma, Inc., 310 Utah Ave Suite 150, South San Francisco, CA 94080, USA.
Marissa L Matsumoto
Gang Yin
Qi Cai
Juan Jose Fung
Heather Stephenson
Avinash Gill
Monica You
Shwu-Hwa Lin
Willie D Wang
Mary Rose Masikat
Xiaofan Li
Kalyani Penta
Alex R Steiner
Ramesh Baliga
Christopher J Murray
Christopher D Thanos
Trevor J Hallam
Aaron K Sato
Sutro Biopharma (United States) · USHalozyme Therapeutics (United States) · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Selection technologies such as ribosome display enable the rapid discovery of novel antibody fragments entirely in vitro. It has been assumed that the open nature of the cell-free reactions used in these technologies limits selections to single-chain protein fragments. We present a simple approach for the selection of multi-chain proteins, such as antibody Fab fragments, using ribosome display. Specifically, we show that a two-chain trastuzumab (Herceptin) Fab domain can be displayed in a format which tethers either the heavy or light chain to the ribosome while retaining functional antigen binding. Then, we constructed synthetic Fab HC and LC libraries and performed test selections against carcinoembryonic antigen (CEA) and vascular endothelial growth factor (VEGF). The Fab selection output was reformatted into full-length immunoglobulin Gs (IgGs) and directly expressed at high levels in an optimized cell-free system for immediate screening, purification and characterization. Several novel IgGs were identified using this cell-free platform that bind to purified CEA, CEA positive cells and VEGF.

Indexed as

Cell-Free SystemImmunoglobulin Fab FragmentsPeptide LibraryAntibodiesAntibodies, Monoclonal, HumanizedCarcinoembryonic AntigenCell Surface Display TechniquesEnzyme-Linked Immunosorbent AssayHumansImmunoglobulin GTrastuzumabVascular Endothelial Growth Factor AAntibodiesAntibodies, Monoclonal, HumanizedCarcinoembryonic AntigenImmunoglobulin Fab FragmentsImmunoglobulin GPeptide LibraryTrastuzumabVascular Endothelial Growth Factor Aantibody reformattingcell-free protein synthesisFab selectionsribosome display

Identifiers

PMID24586053
PMCPMC3966677
OpenAlexW2107351807

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.