Evidence map›Paper›PMID 24585883›Full record

ArticleEukaryotic cell2014

Inhibition and structure of Toxoplasma gondii purine nucleoside phosphorylase.

Teraya M Donaldson, María B Cassera, Meng-Chiao Ho, Chenyang Zhan, Emilio F Merino, Gary B Evans, Peter C Tyler, Steven C Almo, Vern L Schramm, Kami Kim

Open access · diamondAbstract read
In one paragraph

Article in Eukaryotic cell, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
0.9field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 22 citations in OpenAlex.

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  8. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 2 countries.

Teraya M DonaldsonDepartment of Microbiology and Immunology, Albert Einstein College of Medicine, Yeshiva University, Bronx, New York, USA.
María B Cassera
Meng-Chiao Ho
Chenyang Zhan
Emilio F Merino
Gary B Evans
Peter C Tyler
Steven C Almo
Vern L Schramm
Kami Kim
Albert Einstein College of Medicine · USYeshiva University · US

Funding

X-RAY STRUCTURE OF RIFM PROTEIN FROM THE BIOSYNTHESIS PATHWAY OF THE ANSAMYCIN AP41RR012408 · NCRR · BROOKHAVEN SCIENCE ASSOC-BROOKHAVEN LAB · PI ORVILLE, ALLEN M · 1998 to 2011
$32.2M
Macromolecular Crystallography at the National Synchrotron Light SourceP41GM103473 · NIGMS · BROOKHAVEN SCIENCE ASSOC-BROOKHAVEN LAB · PI SWEET, ROBERT M · 2012 to 2013
$4.9M
Purine Pathways and Inhibitor Design in PlasmodiumR01AI049512 · NIAID · YESHIVA UNIVERSITY · PI SCHRAMM, VERN L. · 2002 to 2012
$4.8M
NCRR NIH HHS P41 RR012408NCRR NIH HHS P41RR012408NIAID NIH HHS R01 AI049512NIAID NIH HHS R01AI049512NIGMS NIH HHS P41 GM103473NIGMS NIH HHS P41GM103473
6 · The paper itself

Abstract

The intracellular pathogen Toxoplasma gondii is a purine auxotroph that relies on purine salvage for proliferation. We have optimized T. gondii purine nucleoside phosphorylase (TgPNP) stability and crystallized TgPNP with phosphate and immucillin-H, a transition-state analogue that has high affinity for the enzyme. Immucillin-H bound to TgPNP with a dissociation constant of 370 pM, the highest affinity of 11 immucillins selected to probe the catalytic site. The specificity for transition-state analogues indicated an early dissociative transition state for TgPNP. Compared to Plasmodium falciparum PNP, large substituents surrounding the 5'-hydroxyl group of inhibitors demonstrate reduced capacity for TgPNP inhibition. Catalytic discrimination against large 5' groups is consistent with the inability of TgPNP to catalyze the phosphorolysis of 5'-methylthioinosine to hypoxanthine. In contrast to mammalian PNP, the 2'-hydroxyl group is crucial for inhibitor binding in the catalytic site of TgPNP. This first crystal structure of TgPNP describes the basis for discrimination against 5'-methylthioinosine and similarly 5'-hydroxy-substituted immucillins; structural differences reflect the unique adaptations of purine salvage pathways of Apicomplexa.

Indexed as

CatalysisCatalytic DomainCrystallography, X-RayEnzyme InhibitorsKineticsProtozoan ProteinsPurine-Nucleoside PhosphorylasePurine NucleosidesPyrimidinonesSubstrate SpecificityToxoplasmaEnzyme InhibitorsforodesineProtozoan ProteinsPurine-Nucleoside PhosphorylasePurine NucleosidesPyrimidinones

Identifiers

PMID24585883
PMCPMC4060479
OpenAlexW2060182916

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.