Evidence map›Paper›PMID 24584571›Full record

ArticleHuman molecular genetics2014

Inherited mitochondrial DNA variants can affect complement, inflammation and apoptosis pathways: insights into mitochondrial-nuclear interactions.

M Cristina Kenney, Marilyn Chwa, Shari R Atilano, Payam Falatoonzadeh, Claudio Ramirez, Deepika Malik, Mohamed Tarek, Javier Cáceres-del-Carpio, Anthony B Nesburn, David S Boyer and 6 more

Open access · bronzeAbstract read
In one paragraph

Article in Human molecular genetics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 74 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
74citing papers in PubMed, 1 pooled it
12.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

74 citing papers in PubMed, 1 synthesis or guideline pooled it, 108 citations in OpenAlex.

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14 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 6 institutions in 2 countries.

M Cristina KenneyGavin Herbert Eye Institute, Department of Pathology and Laboratory Medicine, mkenney@uci.edu.
Marilyn ChwaGavin Herbert Eye Institute.
Shari R AtilanoGavin Herbert Eye Institute.
Payam FalatoonzadehGavin Herbert Eye Institute.
Claudio RamirezGavin Herbert Eye Institute.
Deepika MalikGavin Herbert Eye Institute.
Mohamed TarekGavin Herbert Eye Institute.
Javier Cáceres-del-CarpioGavin Herbert Eye Institute.
Anthony B NesburnGavin Herbert Eye Institute, Cedars-Sinai Medical Center, Los Angeles, CA, USA.
David S BoyerRetina-Vitreous Associates Medical Group, Beverly Hills, CA, USA.
Baruch D KuppermannGavin Herbert Eye Institute.
Marquis VawterFunctional Genomics Laboratory, Department of Psychiatry and Human Behavior, University of California Irvine, Irvine, CA, USA.
S Michal JazwinskiTulane Center for Aging, Tulane University, New Orleans, LA, USA.
Michael MiceliTulane Center for Aging, Tulane University, New Orleans, LA, USA.
Douglas C WallaceChildren's Hospital of Philadelphia, Center for Mitochondrial and Epigenomic Medicine, Philadelphia, PA, USA.
Nitin UdarGavin Herbert Eye Institute.
Tulane University · USCedars-Sinai Medical Center · USChildren's Hospital of Philadelphia · USRetina Vitreous Associates Medical Group · USSmerteklinikken · NOUniversity of California, Irvine · US

Funding

Mitochondrial Dysfunction In SchizophreniaR01MH085801 · NIMH · UNIVERSITY OF CALIFORNIA-IRVINE · PI VAWTER, MARQUIS PHILIP · 2009 to 2020
$5.0M
CELLULAR AGING IN A YEAST MODEL SYSTEMR37AG006168 · NIA · TULANE UNIVERSITY OF LOUISIANA · PI JAZWINSKI, S MICHAL · 1994 to 2016
$5.0M
CELLULAR AGING IN A YEAST MODEL SYSTEMR01AG006168 · NIA · LOUISIANA STATE UNIV HSC NEW ORLEANS · PI JAZWINSKI, S MICHAL · 1986 to 1994
–
NIA NIH HHS AG006168NIA NIH HHS R37 AG006168NIMH NIH HHS R01 MH085801
6 · The paper itself

Abstract

Age-related macular degeneration (AMD) is the leading cause of vision loss in developed countries. While linked to genetic polymorphisms in the complement pathway, there are many individuals with high risk alleles that do not develop AMD, suggesting that other 'modifiers' may be involved. Mitochondrial (mt) haplogroups, defined by accumulations of specific mtDNA single nucleotide polymorphisms (SNPs) which represent population origins, may be one such modifier. J haplogroup has been associated with high risk for AMD while the H haplogroup is protective. It has been difficult to assign biological consequences for haplogroups so we created human ARPE-19 cybrids (cytoplasmic hybrids), which have identical nuclei but mitochondria of either J or H haplogroups, to investigate their effects upon bioenergetics and molecular pathways. J cybrids have altered bioenergetic profiles compared with H cybrids. Q-PCR analyses show significantly lower expression levels for seven respiratory complex genes encoded by mtDNA. J and H cybrids have significantly altered expression of eight nuclear genes of the alternative complement, inflammation and apoptosis pathways. Sequencing of the entire mtDNA was carried out for all the cybrids to identify haplogroup and non-haplogroup defining SNPs. mtDNA can mediate cellular bioenergetics and expression levels of nuclear genes related to complement, inflammation and apoptosis. Sequencing data suggest that observed effects are not due to rare mtDNA variants but rather the combination of SNPs representing the J versus H haplogroups. These findings represent a paradigm shift in our concepts of mt-nuclear interactions.

Indexed as

ApoptosisCell NucleusDNA, MitochondrialHumansMitochondriaPolymorphism, Single NucleotideDNA, Mitochondrial

Identifiers

PMID24584571
PMCPMC4049308
OpenAlexW2128544710

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.