Evidence map›Paper›PMID 24583671›Full record

ArticleAIDS (London, England)2014

Genotypic resistance profiles of HIV-2-treated patients in West Africa.

Charlotte Charpentier, Serge Eholié, Xavier Anglaret, Mélanie Bertine, Christine Rouzioux, Véronique Avettand-Fenoël, Eugène Messou, Albert Minga, Florence Damond, Jean-Christophe Plantier and 5 more

Open access · greenAbstract read
In one paragraph

Article in AIDS (London, England), 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed, 2 pooled it
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 2 syntheses or guidelines pooled it, 45 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Trial
  4. Trial
  5. Article
  6. Article
  7. Review
  8. Long-term Experience and Outcomes of Programmatic Antiretroviral Therapy for Human Immunodeficiency Virus Type 2 Infection in Senegal, West Africa.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2021
    Observational
  9. Article
  10. HIV-2 Drug Resistance Genotyping from Dried Blood Spots.Journal of clinical microbiology · 2020
    Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 8 institutions in 3 countries.

Charlotte CharpentieraLaboratoire de Virologie, Assistance Publique-Hôpitaux de Paris (AP-HP), Groupe Hospitalier Bichat-Claude Bernard, HUPNVS, Université Paris Diderot, Sorbonne Paris Cité, Paris, France bDepartment of Infectious and Tropical Diseases, Treichville University Teaching Hospital cDepartment of Dermatology-Infectiology, Medical School, University Felix Houphouët-Boigny dProgramme PACCI, Site ANRS, Abidjan, Côte d'Ivoire eUniversité Bordeaux, INSERM, IPSED, Centre INSERM U897-Epidémiologie et Biostatistique fINSERM, IPSED, Centre INSERM U897-Epidémiologie et Biostatistique, Bordeaux gLaboratoire de Virologie, Faculté de Médecine, AP-HP, Hôpital Necker, Université René Descartes, Sorbonne Paris Cité, Paris hLaboratoire de Virologie, Pôle de Biologie Clinique, Hôpital Charles Nicolle, CHU de Rouen and EA2656, IRIB, Université de Rouen, Rouen iLaboratoire de Pharmaco-Toxicologie, AP-HP, Groupe Hospitalier Bichat-Claude Bernard, HUPNVS, Université Paris Diderot, Sorbonne Paris Cité, Paris, France jFaculté des Sciences de la Santé, Département de Santé Publique, Université de Lomé, Lomé, Togo.
Serge Eholié
Xavier Anglaret
Mélanie Bertine
Christine Rouzioux
Véronique Avettand-Fenoël
Eugène Messou
Albert Minga
Florence Damond
Jean-Christophe Plantier
François Dabis
Gilles Peytavin
Françoise Brun-Vézinet
Didier K Ekouevi
IeDEA West Africa Collaboration
Université Paris Cité · FRAssistance Publique – Hôpitaux de Paris · FRProgramme PAC-CI · CIUniversité Claude Bernard Lyon 1 · FRInserm · FRUniversité de Rouen Normandie · FRUniversité Félix Houphouët-Boigny · CIUniversity Teaching Hospital · ZM

Funding

WADA (West Africa Database on Antiretroviral Therapy) CollaborationU01AI069919 · NIAID · UNIVERSITY OF BORDEAUX II · PI Didier Koumavi Ekouevi, Antoine Jaquet · 2006 to 2026
$29.9M
NIAID NIH HHS U01 AI069919NIAID NIH HHS U01AI069919
6 · The paper itself

Abstract

objectiveTo assess the virological response, genotypic resistance profiles, and antiretroviral plasma concentrations in HIV-2 antiretroviral-treated (antiretroviral therapy, ART) patients in Côte d'Ivoire.

methodsA cross-sectional survey was conducted among HIV-2 patients receiving ART. Plasma HIV-2 viral load was performed using the Agence Nationale de Recherche sur le SIDA et les hépatites virales (ANRS) assay. Protease and reverse transcriptase sequencing was performed using in-house methods and antiretroviral plasma concentrations were assessed using ultra performance liquid chromatography combined with tandem mass spectrometry.

resultsOne hundred and forty-five HIV-2-treated patients were enrolled with a median CD4 cell count of 360 cells/μl (interquartile range, IQR = 215-528). Median duration of ART was 4 years (IQR = 2-7) and 74% of patients displayed viral load less than 50 copies/ml. Median plasma HIV-2 RNA among patients with viral load more than 50 copies/ml was 3016 copies/ml (IQR = 436-5156). Most patients (84%) received a lopinavir/ritonavir-based regimen. HIV-2 resistance mutations to nucleoside reverse transcriptase inhibitors and protease inhibitors were detected in 21 of 25 (84%) and 20 of 29 (69%) samples, respectively. The most prevalent nucleoside reverse transcriptase inhibitor resistance mutations were M184I/V (90%), Q151M (24%), and S215F/Y (24%). The most prevalent protease inhibitor resistance mutations were V47A (60%) and I54M (30%). Median CD4 cell counts were 434 cells/μl (292-573) and 204 cells/μl (122-281) in patients with viral load less than 50 copies/ml and those exhibiting virological failure (P < 0.0001), respectively. The proportions of patients with adequate antiretroviral plasma concentrations were 81 and 93% in patients displaying virological failure and in those with viral load less than 50 copies/ml, respectively (P = 0.046), suggesting good treatment adherence.

conclusionWe observed adequate drug plasma concentrations and virological suppression in a high proportion of HIV-2-infected patients. However, in cases of virological failure, the limited HIV-2 therapeutic arsenal and cross-resistance dramatically reduced treatment options.

Indexed as

AdultAnti-Retroviral AgentsChromatography, LiquidCote d'IvoireCross-Sectional StudiesDrug Resistance, ViralFemaleGenotypeHIV-2HIV InfectionsHumansMaleMiddle AgedMutationPatient ComplianceSequence Analysis, RNAAnti-Retroviral Agents

Identifiers

PMID24583671
PMCPMC4112041
OpenAlexW2073738615

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.