Evidence map›Paper›PMID 24583023›Full record

ArticleNeuron2014

Novel primate miRNAs coevolved with ancient target genes in germinal zone-specific expression patterns.

Mary L Arcila, Marion Betizeau, Xiaolu A Cambronne, Elmer Guzman, Nathalie Doerflinger, Frantz Bouhallier, Hongjun Zhou, Bian Wu, Neha Rani, Danielle S Bassett and 5 more

Open access · bronzeAbstract read
In one paragraph

Article in Neuron, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 81 citations in OpenAlex.

  1. Review
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  5. Article
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  8. Article
  9. Secondary loss ofScience advances · 2022
    Article
  10. Translational control in cortical development.Frontiers in neuroanatomy · 2022
    Article
  11. Review
  12. Article
  13. Review
  14. Review
  15. Article
  16. Article
  17. Article
  18. Molecular and cellular evolution of corticogenesis in amniotes.Cellular and molecular life sciences : CMLS · 2020
    Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 4 institutions in 2 countries.

Mary L ArcilaNeuroscience Research Institute and Department Cellular Molecular and Developmental Biology, University of California, Santa Barbara, Santa Barbara, CA 93106, USA.
Marion BetizeauStem Cell and Brain Research Institute, INSERM U846, 18 Avenue Doyen Lepine, 69500 Bron, France; Université de Lyon, Université Lyon I, 69003 Lyon, France.
Xiaolu A CambronneVollum Institute, Oregon Health & Sciences University, 3181 SW Sam Jackson Park Road, Portland, OR 97068, USA.
Elmer GuzmanNeuroscience Research Institute and Department Cellular Molecular and Developmental Biology, University of California, Santa Barbara, Santa Barbara, CA 93106, USA.
Nathalie DoerflingerStem Cell and Brain Research Institute, INSERM U846, 18 Avenue Doyen Lepine, 69500 Bron, France; Université de Lyon, Université Lyon I, 69003 Lyon, France.
Frantz BouhallierStem Cell and Brain Research Institute, INSERM U846, 18 Avenue Doyen Lepine, 69500 Bron, France; Université de Lyon, Université Lyon I, 69003 Lyon, France.
Hongjun ZhouNeuroscience Research Institute and Department Cellular Molecular and Developmental Biology, University of California, Santa Barbara, Santa Barbara, CA 93106, USA.
Bian WuNeuroscience Research Institute and Department Cellular Molecular and Developmental Biology, University of California, Santa Barbara, Santa Barbara, CA 93106, USA.
Neha RaniNeuroscience Research Institute and Department Cellular Molecular and Developmental Biology, University of California, Santa Barbara, Santa Barbara, CA 93106, USA.
Danielle S BassettNeuroscience Research Institute and Department Cellular Molecular and Developmental Biology, University of California, Santa Barbara, Santa Barbara, CA 93106, USA.
Ugo BorelloStem Cell and Brain Research Institute, INSERM U846, 18 Avenue Doyen Lepine, 69500 Bron, France; Université de Lyon, Université Lyon I, 69003 Lyon, France.
Cyril HuissoudStem Cell and Brain Research Institute, INSERM U846, 18 Avenue Doyen Lepine, 69500 Bron, France; Université de Lyon, Université Lyon I, 69003 Lyon, France; Service de gynécologie-obstétrique, Hôpital de la Croix-Rousse, Hospices Civils de Lyon, 69004 Lyon, France.
Richard H GoodmanVollum Institute, Oregon Health & Sciences University, 3181 SW Sam Jackson Park Road, Portland, OR 97068, USA.
Colette DehayStem Cell and Brain Research Institute, INSERM U846, 18 Avenue Doyen Lepine, 69500 Bron, France; Université de Lyon, Université Lyon I, 69003 Lyon, France. Electronic address: colette.dehay@inserm.fr.
Kenneth S KosikNeuroscience Research Institute and Department Cellular Molecular and Developmental Biology, University of California, Santa Barbara, Santa Barbara, CA 93106, USA. Electronic address: kenneth.kosik@lifesci.ucsb.edu.
University of California, Santa Barbara · USInserm · FRUniversité Claude Bernard Lyon 1 · FRVollum Institute · US

Funding

Dynamic regulation of translation by fragile X mental retardation proteinR01MH093661 · NIMH · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI CEMAN, STEPHANIE · 2012 to 2016
$1.8M
A novel method for identifying microRNA targetsR21NS079317 · NINDS · OREGON HEALTH & SCIENCE UNIVERSITY · PI GOODMAN, RICHARD H. · 2013 to 2014
$422k
Targets of microRNA-132 in adult neurogenesisF32NS076094 · NINDS · OREGON HEALTH & SCIENCE UNIVERSITY · PI CAMBRONNE, XIAOLU ANG · 2011 to 2012
$101k
NIMH NIH HHS R01 MH093661NINDS NIH HHS F32 NS076094NINDS NIH HHS R21 NS079317
6 · The paper itself

Abstract

Major nonprimate-primate differences in cortico-genesis include the dimensions, precursor lineages, and developmental timing of the germinal zones (GZs). microRNAs (miRNAs) of laser-dissected GZ compartments and cortical plate (CP) from embryonic E80 macaque visual cortex were deep sequenced. The CP and the GZ including ventricular zone (VZ) and outer and inner subcompartments of the outer subventricular zone (OSVZ) in area 17 displayed unique miRNA profiles. miRNAs present in primate, but absent in rodent, contributed disproportionately to the differential expression between GZ subregions. Prominent among the validated targets of these miRNAs were cell-cycle and neurogenesis regulators. Coevolution between the emergent miRNAs and their targets suggested that novel miRNAs became integrated into ancient gene circuitry to exert additional control over proliferation. We conclude that multiple cell-cycle regulatory events contribute to the emergence of primate-specific cortical features, including the OSVZ, generated enlarged supragranular layers, largely responsible for the increased primate cortex computational abilities.

Indexed as

Gene Expression RegulationAnimalsCell CycleEvolution, MolecularFemaleMacacaMicroRNAsNeurogenesisNeuronsVisual CortexMicroRNAs

Identifiers

PMID24583023
PMCPMC4020629
OpenAlexW2047794859

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.