Evidence map›Paper›PMID 24582598›Full record

ArticleArchives of biochemistry and biophysics2014

Site-specific insertion of selenium into the redox-active disulfide of the flavoprotein augmenter of liver regeneration.

Stephanie Schaefer-Ramadan, Colin Thorpe, Sharon Rozovsky

Abstract read
In one paragraph

Article in Archives of biochemistry and biophysics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Journal of biomolecular NMR · 2022
    Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Stephanie Schaefer-RamadanDepartment of Chemistry and Biochemistry, University of Delaware, Newark, DE 19716, United States.
Colin ThorpeDepartment of Chemistry and Biochemistry, University of Delaware, Newark, DE 19716, United States.
Sharon RozovskyDepartment of Chemistry and Biochemistry, University of Delaware, Newark, DE 19716, United States. Electronic address: rozovsky@udel.edu.

Funding

Flavoproteins in Oxidative Protein FoldingR01GM026643 · NIGMS · UNIVERSITY OF DELAWARE · PI THORPE, COLIN · 1985 to 2019
$6.6M
CHEMISTRY-BIOLOGY INTERFACE PREDOCTORAL TRAININGT32GM008550 · NIGMS · UNIVERSITY OF DELAWARE · PI BAHNSON, BRIAN J · 1994 to 2018
$5.0M
COBRE on Membrane Protein Production and CharacterizationP30GM103519 · NIGMS · UNIVERSITY OF DELAWARE · PI LENHOFF, ABRAHAM M · 2012 to 2014
$3.3M
NIGMS NIH HHS 1-T32-GM008550NIGMS NIH HHS GM26643NIGMS NIH HHS P30 GM103519NIGMS NIH HHS R01 GM026643NIGMS NIH HHS T32 GM008550
6 · The paper itself

Abstract

Augmenter of liver regeneration (sfALR) is a small disulfide-bridged homodimeric flavoprotein with sulfhydryl oxidase activity. Here, we investigate the catalytic and spectroscopic consequences of selectively replacing C145 by a selenocysteine to complement earlier studies in which random substitution of ∼90% of the 6 cysteine residues per sfALR monomer was achieved growing Escherichia coli on selenite. A selenocysteine insertion sequence (SECIS) element was installed within the gene for human sfALR. SecALR2 showed a spectrum comparable to that of wild-type sfALR. The catalytic efficiency of SecALR2 towards dithiothreitol was 6.8-fold lower than a corresponding construct in which position 145 was returned to a cysteine residue while retaining the additional mutations introduced with the SECIS element. This all-cysteine control enzyme formed a mixed disulfide between C142 and β-mercaptoethanol releasing C145 to form a thiolate-flavin charge transfer absorbance band at ∼530nm. In contrast, SecALR2 showed a prominent long-wavelength absorbance at 585 nm consistent with the expectation that a selenolate would be a better charge-transfer donor to the isoalloxazine ring. These data show the robustness of the ALR protein fold towards the multiple mutations required to insert the SECIS element and provide the first example of a selenolate to flavin charge-transfer complex.

Indexed as

Amino Acid SequenceBase SequenceCatalytic DomainCloning, MolecularEscherichia coliFlavinsFlavoproteinsHumansModels, MolecularMolecular Sequence DataMutagenesis, InsertionalOxidation-ReductionOxidoreductases Acting on Sulfur Group DonorsProteinsRecombinant ProteinsSelenocysteineFlavinsFlavoproteinsGFER protein, ratOxidoreductases Acting on Sulfur Group DonorsProteinsRecombinant ProteinsSelenocysteineAugmenter of liver regenerationCharge-transferDisulfideFlavinSeleniumSelenocysteine insertion sequence

Identifiers

PMID24582598
PMCPMC4009370

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.