Evidence map›Paper›PMID 24577359›Full record

ArticleNature protocols2014

A general protocol for the generation of Nanobodies for structural biology.

Els Pardon, Toon Laeremans, Sarah Triest, Søren G F Rasmussen, Alexandre Wohlkönig, Armin Ruf, Serge Muyldermans, Wim G J Hol, Brian K Kobilka, Jan Steyaert

Open access · bronzeAbstract read
In one paragraph

Article in Nature protocols, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 461 papers.

0numbers the graph read from it
0cells of the map it votes in
461citing papers in PubMed
32.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

461 citing papers in PubMed, 793 citations in OpenAlex.

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  11. A Novel CD147-Targeting Nanobody for Immuno-PET Imaging of Liver Cancer.Journal of nuclear medicine : official publication, Society of Nuclear Medicine · 2026
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401 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 4 countries.

Els Pardon1] Structural Biology Brussels, Vrije Universiteit Brussel (VUB), Brussels, Belgium. [2] Structural Biology Research Center, Vlaams Instituut voor Biotechnologie (VIB), Brussels, Belgium.
Toon Laeremans1] Structural Biology Brussels, Vrije Universiteit Brussel (VUB), Brussels, Belgium. [2] Structural Biology Research Center, Vlaams Instituut voor Biotechnologie (VIB), Brussels, Belgium.
Sarah Triest1] Structural Biology Brussels, Vrije Universiteit Brussel (VUB), Brussels, Belgium. [2] Structural Biology Research Center, Vlaams Instituut voor Biotechnologie (VIB), Brussels, Belgium.
Søren G F RasmussenDepartment of Neuroscience and Pharmacology, The Panum Institute, University of Copenhagen, Copenhagen, Denmark.
Alexandre Wohlkönig1] Structural Biology Brussels, Vrije Universiteit Brussel (VUB), Brussels, Belgium. [2] Structural Biology Research Center, Vlaams Instituut voor Biotechnologie (VIB), Brussels, Belgium.
Armin RufPharma Research and Early Development (pRED), Small Molecule Research, Discovery Technologies, F. Hoffmann-La Roche, Basel, Switzerland.
Serge Muyldermans1] Structural Biology Research Center, Vlaams Instituut voor Biotechnologie (VIB), Brussels, Belgium. [2] Cellular and Molecular Immunology, VUB, Brussels, Belgium.
Wim G J HolDepartment of Biochemistry, Biomolecular Structure Center, School of Medicine, University of Washington, Seattle, Washington, USA.
Brian K KobilkaDepartment of Molecular and Cellular Physiology, School of Medicine, Stanford University, Stanford, California, USA.
Jan Steyaert1] Structural Biology Brussels, Vrije Universiteit Brussel (VUB), Brussels, Belgium. [2] Structural Biology Research Center, Vlaams Instituut voor Biotechnologie (VIB), Brussels, Belgium.
Vlaams Instituut voor Biotechnologie · BEVrije Universiteit Brussel · BERoche (Switzerland) · CHStanford University · USUniversity of Copenhagen · DKUniversity of Washington · US

Funding

Structure and dynamics of G protein coupled receptor-G protein complexesR01GM083118 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI KOBILKA, BRIAN K, SKINIOTIS, GEORGIOS · 2008 to 2023
$8.3M
THE MECHANISM OF BETA2 ADRENOCEPTOR ACTIVATIONR01NS028471 · NINDS · STANFORD UNIVERSITY · PI KOBILKA, BRIAN K · 1990 to 2021
$6.7M
STRUCTURAL STUDY OF HEAT-LABILE ENTEROTOXINR01AI034501 · NIAID · UNIVERSITY OF WASHINGTON · PI HOL, WILHELMUS G. J. · 1993 to 2013
$5.4M
Structure-Function Relationships in Kinetoplastid RNA-EditingR01GM077418 · NIGMS · UNIVERSITY OF WASHINGTON · PI HOL, WILHELMUS G. J. · 2006 to 2009
$2.1M
Structural Biology of Type II Protein Secretion by Bacterial CellsR56AI034501 · NIAID · UNIVERSITY OF WASHINGTON · PI HOL, WILHELMUS G. J. · 2015 to 2015
$490k
NIAID NIH HHS AI34501NIAID NIH HHS R01 AI034501NIAID NIH HHS R56 AI034501NIGMS NIH HHS GM077418NIGMS NIH HHS R01 GM077418NIGMS NIH HHS R01 GM083118NIGMS NIH HHS R01GM083118NINDS NIH HHS R01 NS028471NINDS NIH HHS R01NS028471
6 · The paper itself

Abstract

There is growing interest in using antibodies as auxiliary tools to crystallize proteins. Here we describe a general protocol for the generation of Nanobodies to be used as crystallization chaperones for the structural investigation of diverse conformational states of flexible (membrane) proteins and complexes thereof. Our technology has a competitive advantage over other recombinant crystallization chaperones in that we fully exploit the natural humoral response against native antigens. Accordingly, we provide detailed protocols for the immunization with native proteins and for the selection by phage display of in vivo-matured Nanobodies that bind conformational epitopes of functional proteins. Three representative examples illustrate that the outlined procedures are robust, making it possible to solve by Nanobody-assisted X-ray crystallography in a time span of 6-12 months.

Indexed as

Models, MolecularProtein ConformationAnimalsBiotechnologyCamelusCell Surface Display TechniquesCloning, MolecularCrystallizationDNA PrimersSingle-Domain AntibodiesDNA PrimersSingle-Domain Antibodies

Identifiers

PMID24577359
PMCPMC4297639
OpenAlexW1998292458

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.