Evidence map›Paper›PMID 24573880›Full record

ArticleDatabase : the journal of biological databases and curation2014

TSLP signaling pathway map: a platform for analysis of TSLP-mediated signaling.

Jun Zhong, Jyoti Sharma, Rajesh Raju, Shyam Mohan Palapetta, T S Keshava Prasad, Tai-Chung Huang, Akinori Yoda, Jeffrey W Tyner, Diederik van Bodegom, David M Weinstock and 2 more

Open access · goldAbstract read
In one paragraph

Article in Database : the journal of biological databases and curation, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 55 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
55citing papers in PubMed, 2 pooled it
3.3field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

55 citing papers in PubMed, 2 syntheses or guidelines pooled it, 99 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Article
  4. Review
  5. Article
  6. Article
  7. Review
  8. Article
  9. Review
  10. Article
  11. Review
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 7 institutions in 3 countries.

Jun ZhongMcKusick-Nathans Institute of Genetic Medicine, Johns Hopkins University School of Medicine, 733 N. Broadway, Baltimore, MD 21205, USA, Department of Biological Chemistry, Johns Hopkins University School of Medicine, 733 N. Broadway, Maryland, 21205, USA, Department of Oncology, Johns Hopkins University School of Medicine, 733 N. Broadway, Maryland, 21205, USA, Department of Pathology, Johns Hopkins University School of Medicine, 733 N. Broadway, Maryland, 21205, USA, Institute of Bioinformatics, International Technology Park, Bangalore 560066, India, Manipal University, Madhav Nagar, Manipal 576104, India, Centre of Excellence in Bioinformatics, School of Life Sciences, Pondicherry University, Puducherry 605014, India, Department of Medical Oncology, Dana-Farber Cancer Institute, Harvard Medical School, 44 Binney Street, Boston, MA 02115, USA, Division of Hematology and Medical Oncology, Knight Cancer Institute, Oregon Health and Science University, 3181 SW Sam Jackson Park Road, Mailcode L592, Portland, OR 97239, USA and Immunology Program, Benaroya Research Institute at Virginia Mason, 1201 9th Avenue S&C, Seattle, WA 98101, USA.
Jyoti Sharma
Rajesh Raju
Shyam Mohan Palapetta
T S Keshava Prasad
Tai-Chung Huang
Akinori Yoda
Jeffrey W Tyner
Diederik van Bodegom
David M Weinstock
Steven F Ziegler
Akhilesh Pandey
Cancer Institute (WIA) · INHarvard University Press · USJohns Hopkins University · USPondicherry University · INJohns Hopkins Medicine · USManipal Academy of Higher Education · INOregon Health & Science University · US

Funding

Translational Research Enhancement CoreP30DK089502 · NIDDK · JOHNS HOPKINS UNIVERSITY · PI ZACHOS, NICHOLAS CONSTANTINE · 2011 to 2020
$12.0M
Predoctoral Training Program in Human GeneticsT32GM007814 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI VALLE, DAVID · 1985 to 2021
$10.6M
Networks, Pathways and Dynamics of Lysine ModificationU54GM103520 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI BADER, JOEL S. · 2012 to 2013
$7.0M
CRLF2 signaling in B-cell acute lymphoblastic leukemiaR01CA151898 · NCI · DANA-FARBER CANCER INST · PI WEINSTOCK, DAVID MARC · 2010 to 2019
$3.4M
NCI NIH HHS R01 CA151898NHLBI NIH HHS HHSN268201000032CNIDDK NIH HHS P30 DK089502NIGMS NIH HHS T32 GM007814NIGMS NIH HHS U54 GM103520
6 · The paper itself

Abstract

Thymic stromal lymphopoietin (TSLP) is a four-helix bundle cytokine that plays a critical role in the regulation of immune responses and in the differentiation of hematopoietic cells. TSLP signals through a heterodimeric receptor complex consisting of an interleukin-7 receptor α chain and a unique TSLP receptor (TSLPR) [also known as cytokine receptor-like factor 2 (CRLF2)]. Cellular targets of TSLP include dendritic cells, B cells, mast cells, regulatory T (Treg) cells and CD4+ and CD8+ T cells. The TSLP/TSLPR axis can activate multiple signaling transduction pathways including the JAK/STAT pathway and the PI-3 kinase pathway. Aberrant TSLP/TSLPR signaling has been associated with a variety of human diseases including asthma, atopic dermatitis, nasal polyposis, inflammatory bowel disease, eosinophilic eosophagitis and, most recently, acute lymphoblastic leukemia. A centralized resource of the TSLP signaling pathway cataloging signaling events is not yet available. In this study, we present a literature-annotated resource of reactions in the TSLP signaling pathway. This pathway map is publicly available through NetPath (http://www.netpath.org/), an open access signal transduction pathway resource developed previously by our group. This map includes 236 molecules and 252 reactions that are involved in TSLP/TSLPR signaling pathway. We expect that the TSLP signaling pathway map will provide a rich resource to study the biology of this important cytokine as well as to identify novel therapeutic targets for diseases associated with dysregulated TSLP/TSLPR signaling. Database URL: http://www.netpath.org/pathways?path_id=NetPath_24.

Indexed as

Signal TransductionSoftwareCytokinesGene Expression RegulationHumansMolecular Sequence AnnotationProtein Interaction MappingSubstrate SpecificityThymic Stromal LymphopoietinCytokinesThymic Stromal Lymphopoietin

Identifiers

PMID24573880
PMCPMC3935308
OpenAlexW2138794826

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.