Evidence map›Paper›PMID 24571989›Full record

ArticleBiology of reproduction2014

Epigenetics of human myometrium: DNA methylation of genes encoding contraction-associated proteins in term and preterm labor.

Kohzoh Mitsuya, Natasha Singh, Suren R Sooranna, Mark R Johnson, Leslie Myatt

Open access · greenAbstract read
In one paragraph

Article in Biology of reproduction, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed, 2 pooled it
2.7field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 2 syntheses or guidelines pooled it, 39 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Review
  4. Article
  5. Article
  6. The Role of Genetics in Preterm Birth.Reproductive sciences (Thousand Oaks, Calif.) · 2023
    Review
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Genomic and molecular characterization of preterm birth.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  13. Observational
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  15. Article
  16. Article
  17. Article
  18. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Kohzoh MitsuyaCenter for Pregnancy and Newborn Research, Department of Obstetrics and Gynecology, University of Texas Health Science Center San Antonio, San Antonio, Texas.
Natasha Singh
Suren R Sooranna
Mark R Johnson
Leslie Myatt
Chelsea and Westminster Hospital · GBThe University of Texas Health Science Center at San Antonio · US

Funding

Effects of a Maternal Obesogenic Environment on DNA Methylation in the PlacentaR21HD076266 · NICHD · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI MYATT, LESLIE · 2013 to 2014
$406k
NICHD NIH HHS R21 HD076266
6 · The paper itself

Abstract

Preterm birth involves the interaction of societal and environmental factors potentially modulating the length of gestation via the epigenome. An established form of epigenetic regulation is DNA methylation where promoter hypermethylation is associated with gene repression. We hypothesized we would find differences in DNA methylation in the myometrium of women with preterm labor of different phenotypes versus normal term labor. Myometrial tissue was obtained at cesarean section at term with or without labor, preterm without labor, idiopathic preterm labor, and twin gestations with labor. Genomic DNA was isolated, and samples in each group were combined and analyzed on a NimbleGen 2.1M human DNA methylation array. Differences in methylation from -8 to +3 kb of transcription start sites of 22 contraction-associated genes were determined. Cytosine methylation was not present in CpG islands of any gene but was present outside of CpG islands in shores and shelves in 19 genes. No differential methylation was found across the tissue groups for six genes (PTGES3L, PTGER2, PTGER4, PTGFRN, ESR2, and GJA1). For 13 genes, differential methylation occurred in several patterns between tissue groups. We find a correlation between hypomethylation and increased mRNA expression of PTGES/mPGES-1, indicating potential functional relevance of methylation, but no such correlation for PTGS2/COX-2, suggesting other regulatory mechanisms for PTGS2 at labor. The majority of differential DNA methylation of myometrial contraction-associated genes with different labor phenotypes occurs outside of CpG islands in gene promoters, suggesting that the entirety of DNA methylation across the genome should be considered.

Indexed as

DNA MethylationDNAEpigenesis, GeneticFemaleHumansImmunoprecipitationInfant, NewbornMyometriumObstetric Labor, PrematureOligonucleotide Array Sequence AnalysisPregnancyPromoter Regions, GeneticReverse Transcriptase Polymerase Chain ReactionRNAUterine ContractionDNARNAcontractionDNA methylationepigeneticsepigenomemethylomemyometriumparturitionpregnancypreterm labor

Identifiers

PMID24571989
PMCPMC11488454
OpenAlexW1965288319

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.