Evidence map›Paper›PMID 24569419›Full record

ArticleJournal of hypertension2014

Genetic variants in nicotinic acetylcholine receptor genes jointly contribute to kidney function in American Indians: the Strong Heart Family Study.

Yun Zhu, Jingyun Yang, Shengxu Li, Shelley A Cole, Karin Haack, Jason G Umans, Nora Franceschini, Barbara V Howard, Elisa T Lee, Jinying Zhao

Open access · greenAbstract read
In one paragraph

Article in Journal of hypertension, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.5field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Observational
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 1 country.

Yun ZhuaTulane University School of Public Health and Tropical Medicine, New Orleans, Louisiana bRush Alzheimer's Disease Center & Department of Neurological Sciences, Rush University Medical Center, Chicago, Illinois cTexas Biomedical Research Institute, San Antonio, Texas dMedStar Health Research Institute, Hyattsville, Maryland eUniversity of North Carolina at Chapel Hill, Chapel Hill, North Carolina fCenter for American Indian Health Research, University of Oklahoma Health Science Center, Oklahoma City, Oklahoma, USA.
Jingyun Yang
Shengxu Li
Shelley A Cole
Karin Haack
Jason G Umans
Nora Franceschini
Barbara V Howard
Elisa T Lee
Jinying Zhao
Tulane University · USMedStar Health · USTexas Biomedical Research Institute · USRush University Medical Center · USUniversity of North Carolina at Chapel Hill · USUniversity of Oklahoma Health Sciences Center · US

Funding

The Strong Heart Study, Phase VU01HL041654 · NHLBI · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI LEE, ELISA TAN · 1988 to 2013
$19.2M
CARDIOVASCULAR DISEASE IN THE PIMA INDIANSU01HL041642 · NHLBI · MEDSTAR RESEARCH INSTITUTE · PI HOWARD, BARBARA V · 1988 to 2013
$12.6M
STRONG HEART FAMILY STUDYU01HL065520 · NHLBI · TEXAS BIOMEDICAL RESEARCH INSTITUTE · PI COLE, SHELLEY A · 2000 to 2011
$8.9M
CARDIOVASCULAR DISEASE IN SIOUX INDIANSU01HL041652 · NHLBI · U.S. PHS INDIAN HEALTH SERVICE · PI BEST, LYLE G · 1988 to 2013
$7.9M
CARDIOVASCULAR EVALUATION--STRONG HEART STUDY PHASE IVU01HL065521 · NHLBI · WEILL MEDICAL COLL OF CORNELL UNIV · PI DEVEREUX, RICHARD B · 2000 to 2013
$4.3M
CVD in American Indians Genetics CenterR01HL109301 · NHLBI · TEXAS BIOMEDICAL RESEARCH INSTITUTE · PI COLE, SHELLEY A · 2013 to 2018
$3.2M
Telomere attrition and diabetes risk in American IndiansR01DK091369 · NIDDK · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI HE, JIANG · 2011 to 2014
$1.1M
Biological Aging Mitrochondrial Variants and Coronary Artery DiseaseK01AG034259 · NIA · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI ZHAO, JINYING · 2009 to 2012
$525k
Genetic Variations in the HPA Axis and Comorbidity of Depression and CardiovasculR21HL092363 · NHLBI · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI LEE, ELISA TAN · 2009 to 2010
$403k
NHLBI NIH HHS R01 HL109301NHLBI NIH HHS R21 HL092363NHLBI NIH HHS R21HL092363NHLBI NIH HHS U01 HL041642NHLBI NIH HHS U01 HL041652NHLBI NIH HHS U01 HL041654NHLBI NIH HHS U01 HL065520NHLBI NIH HHS U01 HL065521NHLBI NIH HHS U01HL41642NHLBI NIH HHS U01HL41652NHLBI NIH HHS U01HL41654NHLBI NIH HHS U01HL65520NHLBI NIH HHS U01HL65521NIA NIH HHS K01 AG034259NIA NIH HHS K01AG034259NIDDK NIH HHS R01 DK091369NIDDK NIH HHS R01DK091369
6 · The paper itself

Abstract

backgroundCigarette smoking negatively affects kidney function. Genetic variants in the nicotinic acetylcholine receptor (nAChR) genes have been associated with nicotine dependence, and are likely to influence renal function and related traits. Whereas each single variant may only exert a small effect, the joint contribution of multiple variants to the risk of disease could be substantial.

methodsUsing a gene-family approach, we investigated the joint association of 61 tagging SNPs in seven genes encoding the nAChRs with kidney function in 3620 American Indians participating in the Strong Heart Family Study, independent of known risk factors. Kidney function was evaluated by estimated glomerular filtration rate, urinary albumin/creatinine ratio, albuminuria and chronic kidney disease. The joint impact of smoking-related variants was assessed using the weighted truncated product method.

resultsMultiple SNPs showed marginal individual effect on renal function variability, and only a few survive multiple comparison correction. In contrast, a gene-family analysis considering the joint impact of all 61 SNPs reveals significant associations of the nAChR gene family with kidney function variables including estimated glomerular filtration rate, urinary albumin/creatinine ratio, and albuminuria (all Ps ≤ 0.0001) after adjusting for established risk factors including cigarette smoking.

conclusionGenetic variants in nAChR genes jointly contribute to renal function or kidney damage in American Indians. The effects of these genetic variants on kidney function or damage are independent of traditional risk factors including cigarette smoking per se.

Indexed as

Indians, North AmericanKidney Function TestsAdultFemaleGlomerular Filtration RateHumansMaleMiddle AgedPolymorphism, Single NucleotideProspective StudiesReceptors, NicotinicRisk FactorsReceptors, Nicotinic

Identifiers

PMID24569419
PMCPMC4157895
OpenAlexW2029706832

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.