Evidence map›Paper›PMID 24567321›Full record

ArticleThe Journal of biological chemistry2014

Crystal structure and molecular imaging of the Nav channel β3 subunit indicates a trimeric assembly.

Sivakumar Namadurai, Dilshan Balasuriya, Rajit Rajappa, Martin Wiemhöfer, Katherine Stott, Jurgen Klingauf, J Michael Edwardson, Dimitri Y Chirgadze, Antony P Jackson

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
4.8field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 76 citations in OpenAlex.

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  14. Chemometric Models of Differential Amino Acids at the NaMolecules (Basel, Switzerland) · 2020
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  16. Supramolecular clustering of the cardiac sodium channel Nav1.5 in HEK293F cells, with and without the auxiliary β3-subunit.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Sivakumar NamaduraiDepartment of Biochemistry, University of Cambridge, Tennis Court Road, Cambridge CB2 1QW, United Kingdom.
Dilshan BalasuriyaDepartment of Pharmacology, University of Cambridge, Tennis Court Road, Cambridge CB2 1PD, United Kingdom.
Rajit RajappaInstitute of Medical Physics and Biophysics, University of Münster, Robert-Koch Strasse, 31 48149 Münster, Germany.
Martin WiemhöferInstitute of Medical Physics and Biophysics, University of Münster, Robert-Koch Strasse, 31 48149 Münster, Germany.
Katherine StottDepartment of Biochemistry, University of Cambridge, Tennis Court Road, Cambridge CB2 1QW, United Kingdom.
Jurgen KlingaufInstitute of Medical Physics and Biophysics, University of Münster, Robert-Koch Strasse, 31 48149 Münster, Germany.
J Michael EdwardsonDepartment of Pharmacology, University of Cambridge, Tennis Court Road, Cambridge CB2 1PD, United Kingdom.
Dimitri Y ChirgadzeDepartment of Biochemistry, University of Cambridge, Tennis Court Road, Cambridge CB2 1QW, United Kingdom. Electronic address: dyc21@cam.ac.uk.
Antony P JacksonDepartment of Biochemistry, University of Cambridge, Tennis Court Road, Cambridge CB2 1QW, United Kingdom. Electronic address: apj10@cam.ac.uk.
University of Cambridge · GBUniversity of Münster · DE

Funding

Wellcome Trust 089125/Z/09/Z
6 · The paper itself

Abstract

The vertebrate sodium (Nav) channel is composed of an ion-conducting α subunit and associated β subunits. Here, we report the crystal structure of the human β3 subunit immunoglobulin (Ig) domain, a functionally important component of Nav channels in neurons and cardiomyocytes. Surprisingly, we found that the β3 subunit Ig domain assembles as a trimer in the crystal asymmetric unit. Analytical ultracentrifugation confirmed the presence of Ig domain monomers, dimers, and trimers in free solution, and atomic force microscopy imaging also detected full-length β3 subunit monomers, dimers, and trimers. Mutation of a cysteine residue critical for maintaining the trimer interface destabilized both dimers and trimers. Using fluorescence photoactivated localization microscopy, we detected full-length β3 subunit trimers on the plasma membrane of transfected HEK293 cells. We further show that β3 subunits can bind to more than one site on the Nav 1.5 α subunit and induce the formation of α subunit oligomers, including trimers. Our results suggest a new and unexpected role for the β3 subunits in Nav channel cross-linking and provide new structural insights into some pathological Nav channel mutations.

Indexed as

Amino Acid SequenceBinding SitesCloning, MolecularCrystallizationCrystallography, X-RayDimerizationHEK293 CellsHumansImmunoglobulinsMicroscopy, Atomic ForceMolecular Sequence DataNAV1.5 Voltage-Gated Sodium ChannelProtein ConformationUltracentrifugationVoltage-Gated Sodium Channel beta-3 SubunitImmunoglobulinsNAV1.5 Voltage-Gated Sodium ChannelSCN5A protein, humanVoltage-Gated Sodium Channel beta-3 SubunitAnalytical UltracentrifugationAtomic Force MicroscopyIn Vivo ImagingPhotoactivated Localization MicroscopyProtein TrimerizationSodium ChannelsX-ray Crystallography

Identifiers

PMID24567321
PMCPMC4036194
OpenAlexW2023208565

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.