ArticleMolecular biology reports2014
Isolation, classification and transcription profiles of the AP2/ERF transcription factor superfamily in citrus.
Article in Molecular biology reports, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.
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31 citing papers in PubMed, 85 citations in OpenAlex.
- Genome-wide analysis of AP2/ERF gene family in Camellia oleifera and its potential roles in ethylene-induced fruit abscission.BMC plant biology · 2026Article
- Spatial regulation of chlorophyll degradation in kiwifruit: AcNAC2-AcSGR1/2 cascades mediate rapid de-greening in the inner pericarp.Plant biotechnology journal · 2025Article
- Genome-wide analysis of AP2/ERF family inFrontiers in plant science · 2025Article
- New insights into the transcription factor regulatory networks driving peel coloration under hormone induction analyzed by transcriptomics and metabolomics in tangor 'Murcot'.Frontiers in plant science · 2025Article
- Genome-wide analysis of AP2/ERF transcription factors that regulate fruit development of Chinese prickly ash.BMC plant biology · 2024Article
- Differentially Expressed Genes Identification of Kohlrabi Seedlings (Plants (Basel, Switzerland) · 2024Article
- Physiological, Metabolic, and Transcriptomic Analyses Reveal Mechanisms of Proliferation and Somatic Embryogenesis of Litchi (International journal of molecular sciences · 2024Article
- Genomic-wide identification and expression analysis of AP2/ERF transcription factors in Zanthoxylum armatum reveals the candidate genes for the biosynthesis of terpenoids.The plant genome · 2024Article
- Bioinformatic Assessment and Expression Profiles of theInternational journal of molecular sciences · 2023Article
- Genome-Wide Identification and Functional Analysis of the AP2/ERF Transcription Factor Family in Citrus Rootstock under Waterlogging Stress.International journal of molecular sciences · 2023Article
- Genome-wide identification and molecular characterization of the AP2/ERF superfamily members in sand pear (Pyrus pyrifolia).BMC genomics · 2023Article
- Genome-Wide Analysis of the ERF Family and Identification of Potential Genes Involved in Fruit Ripening in Octoploid Strawberry.International journal of molecular sciences · 2022Article
- Article
- Examining the Role of Low Temperature in Satsuma Mandarin Fruit Peel DegreeningFrontiers in plant science · 2022Article
- Three AP2/ERF family members modulate flavonoid synthesis by regulating type IV chalcone isomerase in citrus.Plant biotechnology journal · 2021Article
- Article
- In silico mining and functional analysis of AP2/ERF gene in Withania somnifera.Scientific reports · 2020Article
- Molecular cloning and characterization of genes related to the ethylene signal transduction pathway in pomegranate (Journal of biosciences · 2019Article
- Expression and Regulation ofGenes · 2019Article
- Genome-wide investigation of the AP2/ERF gene family in tartary buckwheat (Fagopyum Tataricum).BMC plant biology · 2019Article
Corrections and comments
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Authors and funding
8 authors at 2 institutions in 3 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The AP2/ERF gene family encodes plant-specific transcription factors. In model plants, AP2/ERF genes have been shown to be expressed in response to developmental and environmental stimuli, and many function downstream of the ethylene, biotic, and abiotic stress signaling pathways. In citrus, ethylene is effective in regulation citrus fruit quality, such as degreening and aroma. However, information about the citrus AP2/ERF family is limited, and would enhance our understanding of fruit responses to environmental stress, fruit development and quality. CitAP2/ERF genes were isolated using the citrus genome database, and their expression patterns analyzed by real-time PCR using various orange organs and samples from a fruit developmental series. 126 sequences with homologies to AP2/ERF proteins were identified from the citrus genome, and, on the basis of their structure and sequence, assigned to the ERF family (102), AP2 family (18), RAV family (4) and Soloist (2). MEME motif analysis predicted the defining AP2/ERF domain and EAR repressor domains. Analysis of transcript accumulation in Citrus sinensis cv. 'Newhall' indicated that CitAP2/ERF genes show organ-specific and temporal expression, and provided a framework for understanding the transcriptional regulatory roles of AP2/ERF gene family members in citrus. Hierarchical cluster analysis and t tests identified regulators that potentially function during orange fruit growth and development.
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